Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0657 ATGCCTCTATTGTTTTTGTCATTCTTGTTTTCTAAGCACACAGGTCTCACTTTGCTTGATAATGATTGGCTTAATTTGCAGGACTATTATTCACATATAAATATTCTTCCTTCTTCCCCATTTTCCTTCCCTGCATTATCTCCATCAATCTTCCTCAGCTTCTTCCATTGGAGCTTGAGAGAGAGAGAGAGTTTTGAGCCTTGGAGTTCATCAAACTTCTCAGAGGTCTCTCTTGCTGGGAAGGGATTAAGGCACAAGCAAACACAGAAAAAGGGGAAAAGAAAGAAGATGGAAGAGAAATCACTTGCACTTGATGATATTATAAAGGAAGCTGTTGATCTAGAGAACATTCCTCTTGAGGAAGTCTTTGAACATCTCAAATGCACAGAAGAAGGTTTGAGTTCAGAGCAAGTGAAGGAAAGACAGGACTTGTTTGGATATAATAAGCTGGAAGAAAAGAAGGAAAGTAAAATACTCAAGTTTTTGGGGTTCATGTGGAATCCTCTGTCTTGGGTAATGGAAGCTGCTGCTCTCATGGCCATTGCTATGGCACATGGAGGGAACAAACCTGGAGACTATCATGATTTTGCTGGCATAATTATTTTGCTACTTATAAACTCTACCATAAGTTTCATAGAAGAAAACAATGCTGGAAATGCAGCTGCTGCACTTATGGCCCGTTTGGCTCCTAAAGCTAAGGTACTGCGTGATGGAAAATGGAGTGAGGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAACTTGGTGACATCATTCCTGCAGATGCACGTCTCCTTGAAGGAGATCCTTTAAAGATTGACCAGTCTGCTCTTACTGGAGAATCACTTCCAGTAAGCAAACATTCTGGAGATGGAGTGTATTCTGGTTCAACATGCAAGCAAGGAGAAATAGAAGCTGTAGTTATTGCAACTGGAGTCCACACTTTCTTTGGGAAGGCAGCTCATCTTGTGGAAAATACCACACACATAGGACACTTCCAGAAGGTTTTGACGTCTATTGGAAACTTCTGCATATGTTCAATTGCTGTCGGAATGATTATCGAAATCATCGCGATATATGGGATTCAGCAAAGGGGATACCGGGTTGGAGTTGACAACCTCCTCGTGCTACTAATAGGTGGGATCCCAATTGCTATGCCAACTGTTCTTTCAGTCACCATGGCTATTGGTTCACACAAATTGTCTCAGCAGGGTGCTATTACCAAGAGGATGACTGCCATTGAAGAAATGGCTGGAATGGACGTGCTTTGTAGTGACAAAACAGGCACACTAACTCTTAACAAGCTTACTGTGGACAAGAATTTGATTGAGGTTTTCCCCAAAGGTGTGGACAAGGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGATAGAGAACCAGGATGCAATTGATGGTGCAATCGTTGCAATGTTATCAGACCCAAAGGAGGCACGAGCCGGAATAACAGAAGTTCATTTTCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACATTGATGCTGATGGTAAGATGCACAGAGTGAGCAAAGGTGCACCAGAACAGATTCTCCATCTTGCACATAACAAAGCAGAAATTGCACAGAAGGTTCATGCAATTATTGACAAGTTTGCAGAACGTGGACTACGGTCTCTTGCAGTAGCCCGACAGGAAGTACCTGAGGGAACTAAAGACAGTGCAGGAGGGTCCTGGGAATTTGTTGGCCTTCTTCCACTGTTCGATCCTCCTCGCCATGATAGTGCAGAAACAATCAGAAGAGCTCTGGATCTTGGTGTGAGTGTCAAAATGATAACAGGAGATCAGCTTGCAATTGCTAAGGAAACTGGAAGACGTCTAGGAATGGGTACAAACATGTATCCTTCTTCATCTCTTCTTGGTGAAGGAAAAGTTGAAACGCTTAATGCTCTCCCCATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTTCCTGAGCATAAGTATGAGATTGTGAAGAGACTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGCGTAAATGATGCGCCAGCCTTGAAGATAGCTGACATAGGCATAGCTGTGGCAGATTCCACCGATGCTGCTCGAAGTGCATCTGACATAGTTCTAACAGAACCAGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAACTACACAATATATGCTGTATCTATCACCATACGTATTGTGCTGGGCTTTATGTTACTGACCTGCTTTTGGAGATTTGACTTCCCTCCCTTCATGGTTCTTGTAATAGCCATTCTCAACGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCACTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTTCTTGGAGGCTATCTGGCTCTAATGACTGTGATCTTCTTCTGGGCAGCTTATGAAAGTGACTTCTTTGCTAATCATTTCAAAGTGGAAAACTTCAATTCAAAACCTCTCAAAACGCCAGATGGAGATGTTCCCACTCCACTGAAAGAGAAGATGGGATCTGCAGTGTATCTTCAAGTCAGTACAATCAGTCAGGCCTTAATCTTTGTGACTCGCTCCCGGGGATGGTCCTACTCTGATCGACCTGGTCTCCTGCTCGTTATTGCTTTCATTATTGCTCAGCTGGTTGCAACAGTTATATCTGCCACTGTCACTTGGAAAATTGCTGGAATCAGAAAGATAGGTTGGGGCTGGACAGGAGTCATTTGGTTGTACAATGTTTTAACCTATTTATTGCTGGATCCTATAAAATTTGCTGTCCGTTATGCACTAAGTGGAAGAGCGTGGAATCTGGTGGTGGACCAAAGAACTGCATTCACCAACAAAAACGACTTTGGTAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAACAGAGAACCCTGCATGGCCTTCAGTCTGCAGATGCAAAGACATTTGCAGAGAAGCACACCTTCAGGGAAATCAACACACTGGCAGAAGAGGCTAAAAGGCGAGCTGAGATAGTCAGGTTGAGAGAGCTTCACACCCTAAAAGGCAGAGTGGAATCATTTGCCAAGCTAAGAGGCTTGGACGTTGATGCCATCAATGGGCACTACACTGTCTAA 3186 0.4319 MPLLFLSFLFSKHTGLTLLDNDWLNLQDYYSHINILPSSPFSFPALSPSIFLSFFHWSLRERESFEPWSSSNFSEVSLAGKGLRHKQTQKKGKRKKMEEKSLALDDIIKEAVDLENIPLEEVFEHLKCTEEGLSSEQVKERQDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIAMAHGGNKPGDYHDFAGIIILLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMIIEIIAIYGIQQRGYRVGVDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKGVDKDMVVLMAARASRIENQDAIDGAIVAMLSDPKEARAGITEVHFLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILHLAHNKAEIAQKVHAIIDKFAERGLRSLAVARQEVPEGTKDSAGGSWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEGKVETLNALPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWRFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYESDFFANHFKVENFNSKPLKTPDGDVPTPLKEKMGSAVYLQVSTISQALIFVTRSRGWSYSDRPGLLLVIAFIIAQLVATVISATVTWKIAGIRKIGWGWTGVIWLYNVLTYLLLDPIKFAVRYALSGRAWNLVVDQRTAFTNKNDFGREAREAAWAAEQRTLHGLQSADAKTFAEKHTFREINTLAEEAKRRAEIVRLRELHTLKGRVESFAKLRGLDVDAINGHYTV 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0657 1061 FunFam Plasma membrane ATPase 578 734 - -
Dere11g0657 1061 CDD P-type_ATPase_H 132 952 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere11g0657 1061 Gene3D - 1010 1061 - -
Dere11g0657 1061 Gene3D - 424 723 IPR023214 -
Dere11g0657 1061 SMART Cation_ATPase_N_a_2 113 185 IPR004014 -
Dere11g0657 1061 Pfam haloacid dehalogenase-like hydrolase 423 700 - -
Dere11g0657 1061 Pfam Cation transporter/ATPase, N-terminus 116 179 IPR004014 -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 581 592 - -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 686 705 - -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 603 613 - -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 709 721 - -
Dere11g0657 1061 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Dere11g0657 1061 Gene3D - 230 314 - -
Dere11g0657 1061 SFLD C1.7: P-type atpase like 409 737 - -
Dere11g0657 1061 SUPERFAMILY HAD-like 423 733 IPR036412 -
Dere11g0657 1061 FunFam Plasma membrane ATPase 439 586 - -
Dere11g0657 1061 SFLD p-type atpase 409 737 IPR044492 -
Dere11g0657 1061 NCBIfam plasma-membrane proton-efflux P-type ATPase 132 916 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere11g0657 1061 FunFam ATPase 4 plasma membrane-type 670 926 - -
Dere11g0657 1061 FunFam Plasma membrane ATPase 230 314 - -
Dere11g0657 1061 SUPERFAMILY Calcium ATPase, transmembrane domain M 113 958 IPR023298 -
Dere11g0657 1061 Gene3D - 439 586 IPR023299 GO:0000166
Dere11g0657 1061 Pfam E1-E2 ATPase 228 406 - -
Dere11g0657 1061 Gene3D - 192 925 - -
Dere11g0657 1061 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Dere11g0657 1061 PRINTS H+-transporting ATPase (proton pump) signature 717 742 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 PRINTS H+-transporting ATPase (proton pump) signature 658 674 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 PRINTS H+-transporting ATPase (proton pump) signature 686 702 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 PRINTS H+-transporting ATPase (proton pump) signature 871 892 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 PRINTS H+-transporting ATPase (proton pump) signature 543 561 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 SUPERFAMILY Calcium ATPase, transduction domain A 230 327 IPR008250 -
Dere11g0657 1061 PANTHER CALCIUM-TRANSPORTING ATPASE 115 994 - -
Dere11g0657 1061 NCBIfam HAD-IC family P-type ATPase 661 766 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g0657 1061 NCBIfam HAD-IC family P-type ATPase 199 446 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0657 Dere-ChrDere11 11343531 11355731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0657 97 1061 Primary Pumps ATPases AT5G62670 79.378 0.0 1540
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0657 11 11343531 11355731 Dere11g0657 11 11343531 11355731 ECH