Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0654 ATGTCGTTCTCTGGTTCTTCTTCTTCATCATCATCAAATCCCAGATCTTCATCCTCAGAAACCCAATGGCTTTACGACGTGTTCTTGACGTTCCCAGCTGAATATCCATCAATAAGCTCTCTCGAGTCCTCTCTGATAGGTGCTTCGATCAAAACAATCATTGACTACAACGAAAAGATCTCACCTAAACTACTGCAAGCCATCGAACGGTCCAGAATTGTTGTCGTCGTATTCACCAAAGTGATCGGTGATTCCAGAAACTTTCTGGATAAGCTGGACGTGATAATGGAGTATACGGGGAAGATGGTGTTGCCTATATTCTGGGGTGTGAGTCAAGGGGAAGCACGTCAGTTGATTAGCAGATTGGCGAGCGAGGAAGATGATCTGAGCAAAGATGATCAGTCGCGGCGGAGAAGACGGCTGGCCGAAGCTACGTCGCTGGTCGGCCGGAGTGTCGCAAGACGGCTTGCCGAGGCTACGTCGCTGGTCGGCCGGAGTACTGCGTCAAGTTCCAGTGCAAGAAATGGTGATATACATGATGAAATCATTGACTACATTAAGATGGAACTAAACAAGACATACTTGGATATCCCACGACATGTGGTGGGGTTACAAAATCGTGTGAATGAAGTGCTTCGTTTGTCCAAGTACTATTCAAAAGATCTTGTTCTTAGGAAAGAAAATGTGATCATAGTAGGTATATGGGGAAGTGGAGGAATTGGCAAAACAACAATTGCCAAAGCTATTTATAATACAATTCACGGCAACTTTGAGGGACAGAGCTTCCTTGAAAATATAAAAAATGTGTCAGAAAAAGATAATGGTCTTGTTTGTCTACAAGAGCAACTTATTTCAAACATTTCATATACAAAGCATGAGAAGATACTTGACGTTGAAACTGGAATTAGACAAATGAAGATAATACTGCACCAGAAAAGGGCACTTGTAGTACTTGATGATGTAAGTCAAATAGACCAACTCATGGCATTGTGTGGAAGTCGTGAATGGTTTGGTGCTGGGAGTATGATCCTCATTACAACAAGAAATAAGCTTCTACTTGATTATCTCAAAGTCAAATATGTCTATCAAGTGAAAAAAATGGACAAAAGTGAATCTATGGAGGTTTTTAGCTGGAATGCATTCAAGCAATCTAGTCCTAGAATTGATTTCAATAATCTTGCAAAAAGAGTAATTACTTACTGCGAAGGATTACCACTGATTCTTCAAGTCCTTGGCTCACTTTTGTTTGATAGGACAATACCAGAGTGGCAAAATGTATTAGAGAAATTGAAAAGCATTCCTAGAGGTCAAATACAAGAGAAACTCAAAATAAGTTATGAGTATTTAGATTATTCGATTAAAGATATATTCTTCAATATAGCTTGCTTTTATGTTGGTGAAGAAAAACAGTATGTCATGCAAAAATTAAGTGGCTTCAAAAGTCCTGTAGAAATCGGAATAAGCATGCTTATTGACTGGAGCCTTGTAAAAGTTGACATGTATAACAAGCTTGATATGCATGATTTGCTACAAGAGATTGTAAAGGGCATCAATCCTACTAAGTCAAATCCCAAATATATCTACAATGTGTTCTTGAGCTTCAGAGGTGAAGATACTCGCAAGTCTCTTGCCACTCATCTTTACGTTGCATTACAAAGGGCTGGTGTTAAGGTTTTCATGGATAATGAGATTAGAAGGGGAGAAATTATTTCATCCTCACTAACACAAGCAATTGAATGTTCCAGAATGTCAATCATTATTTTTTCAATAAATTATGCTGGCTCTAGATGGTGCTTGCAAGAATTGGAGAAAATTATGGAATGTCACAAAGCTAATGGTCAAGAGGTTTTTCCTATATTTTATGGCGTGCAACCATCAGATGTACGTAAGCAAATTGGCTCTTTTGGAAATACATTGGAAAGACTTATAATCAAAAGCTCAGCTAGCAAAGACAAGAAATTGAGTTGGACAAGAGCACTCAGTGAAGCTGCCAATTTATCTGGGTGGGACTCGAATCATTATAGAACTGATGCTGAGATGATTGACCATGTTATTGAAACTATTACCATGAAGGTAAACGACAACATGTATCTATATGTTGCTCATCACCCTGTGGGAGTGAAGTCTCGTATGCAGGAAATCATTCAATTTTTAAGGGGTAAATCAAACGAGATTATCATAGTAGGGATTGTTGGCATGGGGGGAATCGGTAAAACAACCATTGCCAAAGCCATTTACAATGAAATTAATCAAGGCTTTGAGGGTAAAAGTTTCCTTACAAATATTAGGGAAGTTTGGGAGCAAGAAAATGGCCAAGTTTCTTTGCAAGAACAACTTCTTTCAGACGTTTCACAAACAAGAAGGGTGACTCTACGTAGCATTGAATTAGGGAAAGCTATAATGAAGGAAAGGCTTCATCATAAAAGGGCACTTGTTGTACTTGATGATGTAAATAATATGGACCAACTAAATGCGCTGTGTGGAAGTCGTGAATGGTTTGGTCCAGGCAGTAGAATAATCATCACTACTAGAGATGAGCATTTATTGAAGGTCCTTCAAGTCGATAATGTATACAACATGAAGGAAATGGATGATAATGAGTCTCTTGAACTATTTAGTTGGCACGCATTTAAGCAAGCAAGGCCAATAGAAGATTTCATTGAACTCTCGACAAGGGTTATTGCTTACTCTGGAGGACTGCCACTAGCTCTAGAAGTCCTTGGGTCTTATTTGTTTGATAGGACAGTACAAGCTTGGGAAAGTATTTTAGACAAACTAAAGGAAATCCCAAATGATCAAATACATAAAAAGCTCAAACTAAGCTATGATGGTTTGAGTGATGATTTGGAGAAAGATATATTCTTGGATATATGTTGTTTTTTTATTGGTAAGGACAGAAATTATGTTACAAAAATATTAGATAGTTGTGGACTTCATGCAGAAATTGGAATTACTCGACTCATAGAGCGGAGCCTTGTAAAAGTTGGAAAGAATAACAAGCTTGATATGCATGGTTTACTACGTGACATGGGAAAAGAGATCATTCGTGAAAAGTCCCCAGAGGAGCCTGAGAAGCGTACCAGGTTATGGTTTCCTAATGATGTGCTTGATGTGTTAAAAAACTATATGGGAACAATAGCTATTAAGGGATTGGCTTTGAATTTGTCAAGAAGCAATACACTTTCAATTGATACAATCGCATTTAAGATCATGAAGAGACTTAGATTGCTTCAGCTTGGCCATGTAGAGCTTGATGGGAACTATGAATATCTATCAAAAGAGTTACGGTGGCTTTGTTGGCGTGGGTTTCCTTTAAAGTGCATGCCTGAGAATTTTTATTTGGGAAATGCAGTTGCTATTGACTTCAAATATAGCTATCTCACACGAGTATGGAAGAAGTGTCAGTTGTTGGAGAGGTTGAAAATTCTCAATCTAAGTCATTCCCATTACTTGATTCAAACACCTGACTTTTCAAAGTTACCAAATCTTGAAAGGTTAATACTTAAAGATTGTGCAAATTTGTCTTCTGTTGATTCGTCCGTTGGAGACCTTAAATACCTGATTATGGTGAATTTAAAGGATTGTAAAGATCTTAGCCATCTGCCAAGGACTTTATATAAGGTAAAATCTCTGAAAAATCTAAATCTTTCGGGTTGTTCAAAGATTGAAAAGCTTGAAGAAGACATCGGGCAAATGGAATCTTTGACAAGTCTACAGGCAAATGAAACTGCAATAACACAAGTGCCATATTCATTAGTGAAGTTAAAAAGTATCAATTATGTGTCGTTATGTGGCTATGAAGGTTTAGCACATGAAGTATTTCCACCTCTCATTCAGTCATGGATGTCACCAACAAGTAATCCAAGGTCCCTTGTTCAAGCATTTCCAAGCATGCGACTTTTACTACAAAATCTTTTGCACAATTTCTCTATTCAAAGTAGTGGCAAATTGGAAACAAGACCAAGTAGATCTCAAATCTCACGTGCAAAAACTTCATCATTGATTGGTTTTTATGACCAAGTTCACATTGCAGAGGCTCAAAATTTCATTAGTTCCCTTACTATTCAAGTGGGAGGATTCAACGAAATCATTGATGCACTCTTAACGAATATCTCACAGGGATGGAGTGATAGAGGGCTTGATTGTCCTCTTCCTGGAGACAATTTTCCTTATTGGATAGCTTTTGAAGATGAAGGATCCTCAGTATCATTTAAAGTATCTCAAGTTATTGGTCACTGTTTAAAAGGAATGGTGCTTTGCGTTATCTATTTATCTGCCCAAGATAGCATGGCATCTATATATCCAATGAGTGTAATGGTAAAAAATTTTACGAAGGCTACCATTGAATTCTACAAACGAGATGCTACAACTACTTCTAACGATGAAGAATGGCACAACATAGTACTTAATTTAGAGCCTGGAAATGAGGTGGACGTTATAGTAAATTTTGCACATAAGTATATTGTGAAGAAGACTGCAGTTTATGTGGTATATGGTGAGGAAATTTAG 4509 0.3777 MSFSGSSSSSSSNPRSSSSETQWLYDVFLTFPAEYPSISSLESSLIGASIKTIIDYNEKISPKLLQAIERSRIVVVVFTKVIGDSRNFLDKLDVIMEYTGKMVLPIFWGVSQGEARQLISRLASEEDDLSKDDQSRRRRRLAEATSLVGRSVARRLAEATSLVGRSTASSSSARNGDIHDEIIDYIKMELNKTYLDIPRHVVGLQNRVNEVLRLSKYYSKDLVLRKENVIIVGIWGSGGIGKTTIAKAIYNTIHGNFEGQSFLENIKNVSEKDNGLVCLQEQLISNISYTKHEKILDVETGIRQMKIILHQKRALVVLDDVSQIDQLMALCGSREWFGAGSMILITTRNKLLLDYLKVKYVYQVKKMDKSESMEVFSWNAFKQSSPRIDFNNLAKRVITYCEGLPLILQVLGSLLFDRTIPEWQNVLEKLKSIPRGQIQEKLKISYEYLDYSIKDIFFNIACFYVGEEKQYVMQKLSGFKSPVEIGISMLIDWSLVKVDMYNKLDMHDLLQEIVKGINPTKSNPKYIYNVFLSFRGEDTRKSLATHLYVALQRAGVKVFMDNEIRRGEIISSSLTQAIECSRMSIIIFSINYAGSRWCLQELEKIMECHKANGQEVFPIFYGVQPSDVRKQIGSFGNTLERLIIKSSASKDKKLSWTRALSEAANLSGWDSNHYRTDAEMIDHVIETITMKVNDNMYLYVAHHPVGVKSRMQEIIQFLRGKSNEIIIVGIVGMGGIGKTTIAKAIYNEINQGFEGKSFLTNIREVWEQENGQVSLQEQLLSDVSQTRRVTLRSIELGKAIMKERLHHKRALVVLDDVNNMDQLNALCGSREWFGPGSRIIITTRDEHLLKVLQVDNVYNMKEMDDNESLELFSWHAFKQARPIEDFIELSTRVIAYSGGLPLALEVLGSYLFDRTVQAWESILDKLKEIPNDQIHKKLKLSYDGLSDDLEKDIFLDICCFFIGKDRNYVTKILDSCGLHAEIGITRLIERSLVKVGKNNKLDMHGLLRDMGKEIIREKSPEEPEKRTRLWFPNDVLDVLKNYMGTIAIKGLALNLSRSNTLSIDTIAFKIMKRLRLLQLGHVELDGNYEYLSKELRWLCWRGFPLKCMPENFYLGNAVAIDFKYSYLTRVWKKCQLLERLKILNLSHSHYLIQTPDFSKLPNLERLILKDCANLSSVDSSVGDLKYLIMVNLKDCKDLSHLPRTLYKVKSLKNLNLSGCSKIEKLEEDIGQMESLTSLQANETAITQVPYSLVKLKSINYVSLCGYEGLAHEVFPPLIQSWMSPTSNPRSLVQAFPSMRLLLQNLLHNFSIQSSGKLETRPSRSQISRAKTSSLIGFYDQVHIAEAQNFISSLTIQVGGFNEIIDALLTNISQGWSDRGLDCPLPGDNFPYWIAFEDEGSSVSFKVSQVIGHCLKGMVLCVIYLSAQDSMASIYPMSVMVKNFTKATIEFYKRDATTTSNDEEWHNIVLNLEPGNEVDVIVNFAHKYIVKKTAVYVVYGEEI 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0654 1502 Gene3D Ribonuclease Inhibitor 1045 1305 IPR032675 -
Dere11g0654 1502 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 528 1269 IPR044974 GO:0006952
Dere11g0654 1502 FunFam Disease resistance protein (TIR-NBS-LRR class) 524 694 - -
Dere11g0654 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 458 IPR027417 -
Dere11g0654 1502 SMART till_3 24 147 IPR000157 GO:0007165
Dere11g0654 1502 SMART till_3 527 666 IPR000157 GO:0007165
Dere11g0654 1502 Gene3D - 17 190 IPR035897 -
Dere11g0654 1502 SUPERFAMILY L domain-like 1020 1276 - -
Dere11g0654 1502 PRINTS Disease resistance protein signature 727 742 - -
Dere11g0654 1502 PRINTS Disease resistance protein signature 804 818 - -
Dere11g0654 1502 PRINTS Disease resistance protein signature 1206 1222 - -
Dere11g0654 1502 PRINTS Disease resistance protein signature 897 911 - -
Dere11g0654 1502 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 122 IPR035897 -
Dere11g0654 1502 Pfam TIR domain 528 691 IPR000157 GO:0007165
Dere11g0654 1502 Pfam TIR domain 58 132 IPR000157 GO:0007165
Dere11g0654 1502 Pfam NB-ARC domain 227 453 IPR002182 GO:0043531
Dere11g0654 1502 Pfam NB-ARC domain 709 942 IPR002182 GO:0043531
Dere11g0654 1502 SUPERFAMILY "Winged helix" DNA-binding domain 933 1040 IPR036390 -
Dere11g0654 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 695 957 IPR027417 -
Dere11g0654 1502 Gene3D - 191 361 IPR027417 -
Dere11g0654 1502 Gene3D - 694 857 IPR027417 -
Dere11g0654 1502 SUPERFAMILY Toll/Interleukin receptor TIR domain 521 669 IPR035897 -
Dere11g0654 1502 ProSiteProfiles TIR domain profile. 23 145 IPR000157 GO:0007165
Dere11g0654 1502 ProSiteProfiles TIR domain profile. 526 692 IPR000157 GO:0007165
Dere11g0654 1502 SMART AAA_5 724 864 IPR003593 GO:0016887
Dere11g0654 1502 SMART AAA_5 228 356 IPR003593 GO:0016887
Dere11g0654 1502 Gene3D - 525 693 IPR035897 -
Dere11g0654 1502 Gene3D - 366 450 IPR042197 -
Dere11g0654 1502 Gene3D - 862 946 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0654 Dere-ChrDere11 11301684 11309826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0654 14 536 WRKY Transcription Factor Family AT4G12020 27.206 3.42e-32 135