Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0651 ATGCCGTTCTTGGATATGCCACGACATCTAATGGGGATACAACATCGTGTGAAAGAAGTGCTTCATTTGGCCAAATACTATTCAAATATAGTTATCAGGAAAGAATATGTGATCACAGTAGGTATATGGGGAACTGGAGGAATTGGCAAAACAACTCTTGCTAGAGCTATTTATGATTCATTTAGTGGCAGTTTTGAGAGTCAATGTTACCTTGAAAATATAACAAATGTAATGGAAAAACAAAATGGTCTAGGTTGTCTACGAGAACAACTTATTTCAGATATTCATACAAAACATGAGAAGATACTTGACAGTAAGATGGAAATTAGACGAATAACGCCTACTTTACGCAATAAAAGGGCACTTGTAGTACTTGATGATGTAAGTGAAGTACACCAATTCAAGGCATTGTGTGGAACTGATGCATGGTTTGGTTTTGGGAGTATGATACTCATTACAACAAAAAATAAGCATATACTTGATGAACTACAAGTCAAATACATCTATGAGATGAAAAAATTGGACAACAGTGAATCTCTTGATCTTTTCAGCTGGAATGCATTCAAGCAATATAGTCCTCGGAATGATTTCAATATTCTCGCAAGAAAGGTGATTACTTACTGCGAAGGATTACCTTTGGTTCTCGAAGTCCTTGGCTCTCTTTTGTTTAATAGGACAATACCAGAGTGGAAAAGTGTATTGAATAAGATCAAATGCATTTCCCCAGGTCAAATACAAGAAAAGCTCAGAATATGCTATGAGTATTTGGATGATGCAATCAAGGATATTTTCTTTAATATTGCTTGCTTTTATGTGGGTGAGGAAAAACAATATGTCATGCAAAAACTAGGTGGCTTCCGATTCCCAATAGAAACTGGAATAAATATGCTTATTGAGCAGAGCCTTGTAAAAGTTGACATGAATGGCAAGCTTAATATGCATGATTTGTTGCAAGAGTTTGGAAAGGGACTAAATCGTAATAAGCCAACGGCCAAATACAATGTGTTCTTGAGTTTCAGAGGAGAAGATACACGTAAGTCTTTTGCTTCTCATCTCTATGTTGCATTAAAAAATGCTGGTGTTGAGGTATTCATGGATAATGGCATTAAAAGGGGAGAAAGTATTTCATCCACACTCATGCAAGCAATTGAAAGTTCCAAAATGTCAATCGTTATTTTTTCAATCAATTATGCGGGCTCTAAATGGTGCTTGCAAGAACTAGAGAAAATTATGGAGTGTCATAGAACGTTTCATCAAGAGGTTCTACCCATATTTTATGGTGTGCAACCATCAGATGTACGTAAGCAAACTGGCAATTTTGGAAAAGCATTGGAAGGACTTATAAGGAGAACTACAGCTACCAAAGACAAGAAATTGAGCTGGACGAAAGCTCTCAATGATGCTGCCAATTTATCTGGGTGGGACTCGCTTCAATATAGAACTGAAGTTGAGTTGATTAACAATGTCATTGAAACTGTTACAATGAAACTAGATAACAACACACTTTTATTTGTTGCTGATCACCCAGTGGGAGTGAAGTCTCGTGTGCAGGAAATCATCCAATTGTTAAGTGCCAAATCAGATGAGATTGTCATTGTAGGGATTTTTGGCATGGGGGGAATTGGTAAAACAACCATTGCCAAAGCCATTTACAATGAAATTAGTCAAAGCTTTGATGGTAAAAGTTTTCTTACAAATATTAGGGAAATTTGGGAGCAAGTGAATGGCCATGTTTATTTGCAGGAACAACTTCTTTTAGACATCCTACAAACAAGAAGGATGACACTATATAGTGTTGAATTTGGGAAAGCTATAATGAAAGAAAGGCTTTGTCATAAAAGGGCACTTGTTGTACTTGATGATATAAATAATGTGGACCAACTCAATGCTCTATGTGGAAGTCGTGAATGGTTTGGTCCAGGTAGTAGAATAATCATCACCACGAGAGATGAGCATCTACTCAAGATCCTTCAAGTGGATAATGAATACAATATGAAAGACATGGATGATGACGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAGCAAGCAAGTCCGTTAGAAGATTTTGTTGAACTCTCAAGAAGGGTTATTGCGTACTCTGAAGGATTGCCACTAGCTCTTGAAATCCTTGGTGCATGTTTGCGTGATAGGACAATGCAAGATTGGGAATGTGTTTTAGACAAACTATGTGGAATTCCAAATGATCAAATACATAAAAAGCTAAGAATAAGCTATGATGGTTTGAGTGATGATTCAGAAAAAGATATATTCTTAGATATTTGTTGTTTTCTTATTGGTAAGGATAGAAATTATGCTACACAAATATTAGATGGATGTGGACTTCATGCGGAATTTGGAATTACTCGTCTAATAGAACTGAGTCTTGTAAAAGTTGACAAGAATAACAAGCTTGATATGCATGGTTTACTACGTGACATGGGAAGAGAGATCATTCGGGAAAAGTCAGTAGAAGAGCCTGAGAAGCGTACTAGATTGTGGTGTCATAATGATGTAGTTGATGTGTTAAGAAACCACTTGGGAACAATTTCTGTCAAGGGATTGGCTTTGAATTTGTCAAGAACCAATATGCTTTCCTTTGATACTGTTTCATTTAAGATGATGAGAAGACTTAGATTGCTTCAACTTGGCTATGTAAAACTTGATGGGAACTATGAATATCTATCAAAAGAATTGAGGTGGCTTCATTGGCATGGGTTTCCATTAAGTCACATGCCTAAGGATTTTTATCAAGAGAATGTGGTTGCTATTGATTTAAAATATAGTTATCTCACACAAGTATGGAACAATTGCCAGTTGTTGGAGAGGTTGAAAATTCTCAATCTAAGCCATTCCTATTACTTGAGACAAACACCTAACTTTTCAAATTTACCAAATCTTGAAAAGCTACTGCTCAAAGATTGTCCGCGTCTGTGTTTTGTTCACCCATCCATTGGAGATCTTAAATACCTGATTGTGGTGAATATGAAGAACTGTAAAGATCTCATTGATGTGCCAAGAAGTTTTTATAATTTGAAATCTGTGAAGACTCTCATTATTACTGGTTGTTCAAGGATTGACAAATTAGAAGAAGGAATCGATCAAATGGAATCCTTAACAACTCTACTAGCAAATGATACTGCTATAACAAAAGTGCCCTTCTCATTAGCGAGAGCAAGAAGCATCAAATATTTGTCATTATGTGGATATCAAGGATTACCACATGATGTATTTCCTTCTCTCATTTGGTCTTGGATGTCACCGAGAAATAACCCGAGGTCCCTCATTAGAGCATTCGCAAGCATGCCATTTTTACTACAAAATCTCTTTCACAATTTGTCTAACCAAAGTAGTGGAAAATGGGAAACAAAAGCAAGTGCATCCCATATCTTATGTGCAGAAACTTCAGCATTAATTGGTTTTCATGACCAAGTCAATGATATAGGGGCTGAAAAGTTCACGAGTTCCCTTGCTATTCAATTCGGAGGATTCAACAAGGCCATTGATACACTTTTGAAGAGTATCACACAGGAATGGAGTGATACGGGGTTTGGATGTTCTCTTCCTAAAGACAATTATCCTAATTGGCTAGGTTTTGAAAATGAAGGATCCACAATATTGTTTAAAGTTTCTCACATTGTTGGTCATTTCTTAAAAGGGATGATCCTCTGCATTATCTACTCGTCACGCCAAGATAGCATGGCATTTGTATATCCTGTTAGTGTCATCATAAAAAATTTCACAAAGGCTACCATTGAGTTCTACAGACGAGGTGCTGAAACTACTTCTAATGACGAAGAATGGGAGAACATAATATCCAATTTGGAGCCAGGAAATGAAGTGGAAGTTAAAGTAGATTTTGCGCATAAATATCTTATAAAGAAGACTGCAGTCTATCTGGTATACGGTGAAGAAACTGACAAAAGATCTGGGGGTATCATAATTTAG 3951 0.3647 MPFLDMPRHLMGIQHRVKEVLHLAKYYSNIVIRKEYVITVGIWGTGGIGKTTLARAIYDSFSGSFESQCYLENITNVMEKQNGLGCLREQLISDIHTKHEKILDSKMEIRRITPTLRNKRALVVLDDVSEVHQFKALCGTDAWFGFGSMILITTKNKHILDELQVKYIYEMKKLDNSESLDLFSWNAFKQYSPRNDFNILARKVITYCEGLPLVLEVLGSLLFNRTIPEWKSVLNKIKCISPGQIQEKLRICYEYLDDAIKDIFFNIACFYVGEEKQYVMQKLGGFRFPIETGINMLIEQSLVKVDMNGKLNMHDLLQEFGKGLNRNKPTAKYNVFLSFRGEDTRKSFASHLYVALKNAGVEVFMDNGIKRGESISSTLMQAIESSKMSIVIFSINYAGSKWCLQELEKIMECHRTFHQEVLPIFYGVQPSDVRKQTGNFGKALEGLIRRTTATKDKKLSWTKALNDAANLSGWDSLQYRTEVELINNVIETVTMKLDNNTLLFVADHPVGVKSRVQEIIQLLSAKSDEIVIVGIFGMGGIGKTTIAKAIYNEISQSFDGKSFLTNIREIWEQVNGHVYLQEQLLLDILQTRRMTLYSVEFGKAIMKERLCHKRALVVLDDINNVDQLNALCGSREWFGPGSRIIITTRDEHLLKILQVDNEYNMKDMDDDESLELFSWHAFKQASPLEDFVELSRRVIAYSEGLPLALEILGACLRDRTMQDWECVLDKLCGIPNDQIHKKLRISYDGLSDDSEKDIFLDICCFLIGKDRNYATQILDGCGLHAEFGITRLIELSLVKVDKNNKLDMHGLLRDMGREIIREKSVEEPEKRTRLWCHNDVVDVLRNHLGTISVKGLALNLSRTNMLSFDTVSFKMMRRLRLLQLGYVKLDGNYEYLSKELRWLHWHGFPLSHMPKDFYQENVVAIDLKYSYLTQVWNNCQLLERLKILNLSHSYYLRQTPNFSNLPNLEKLLLKDCPRLCFVHPSIGDLKYLIVVNMKNCKDLIDVPRSFYNLKSVKTLIITGCSRIDKLEEGIDQMESLTTLLANDTAITKVPFSLARARSIKYLSLCGYQGLPHDVFPSLIWSWMSPRNNPRSLIRAFASMPFLLQNLFHNLSNQSSGKWETKASASHILCAETSALIGFHDQVNDIGAEKFTSSLAIQFGGFNKAIDTLLKSITQEWSDTGFGCSLPKDNYPNWLGFENEGSTILFKVSHIVGHFLKGMILCIIYSSRQDSMAFVYPVSVIIKNFTKATIEFYRRGAETTSNDEEWENIISNLEPGNEVEVKVDFAHKYLIKKTAVYLVYGEETDKRSGGIII 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0651 1316 ProSiteProfiles TIR domain profile. 331 497 IPR000157 GO:0007165
Dere11g0651 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 265 IPR027417 -
Dere11g0651 1316 Gene3D - 5 168 IPR027417 -
Dere11g0651 1316 Gene3D - 496 663 IPR027417 -
Dere11g0651 1316 Gene3D Ribonuclease Inhibitor 839 1119 IPR032675 -
Dere11g0651 1316 SUPERFAMILY L domain-like 857 1104 - -
Dere11g0651 1316 PRINTS Disease resistance protein signature 702 716 - -
Dere11g0651 1316 PRINTS Disease resistance protein signature 940 956 - -
Dere11g0651 1316 PRINTS Disease resistance protein signature 532 547 - -
Dere11g0651 1316 PRINTS Disease resistance protein signature 609 623 - -
Dere11g0651 1316 Pfam NB-ARC domain 514 732 IPR002182 GO:0043531
Dere11g0651 1316 Pfam NB-ARC domain 38 243 IPR002182 GO:0043531
Dere11g0651 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 762 IPR027417 -
Dere11g0651 1316 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 333 1074 IPR044974 GO:0006952
Dere11g0651 1316 SUPERFAMILY "Winged helix" DNA-binding domain 738 844 IPR036390 -
Dere11g0651 1316 FunFam Disease resistance protein (TIR-NBS-LRR class) 329 499 - -
Dere11g0651 1316 SMART till_3 332 471 IPR000157 GO:0007165
Dere11g0651 1316 Gene3D - 667 751 IPR042197 -
Dere11g0651 1316 Gene3D - 173 257 IPR042197 -
Dere11g0651 1316 Pfam TIR domain 332 496 IPR000157 GO:0007165
Dere11g0651 1316 SMART AAA_5 529 669 IPR003593 GO:0016887
Dere11g0651 1316 SMART AAA_5 36 175 IPR003593 GO:0016887
Dere11g0651 1316 SUPERFAMILY Toll/Interleukin receptor TIR domain 330 474 IPR035897 -
Dere11g0651 1316 Gene3D - 330 495 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0651 Dere-ChrDere11 11244273 11250027 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0651 9 328 WRKY Transcription Factor Family AT4G12020 28.660 9.91e-31 130