Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0649 ATGTATTCGAGCGATTTCGACGGCGCTGCAGCCTTCTCCGGCGGTGGATTTATGCCGTCTCAGGCAACACAGGGCGCAGAACCTTCCTTCTACCCCTCCAAGAATCGGGATGCTCAGTCATTGCTTCCTCTGACGATCAAGCAGATAAATGATGCATTTCTGTCAAGCGATGATAAGTCTAACATGATTATTGATGGCGTGGATGTTAATAATGTTACTCTCGTAGGAAGGGTGTGCAACAAAGCCGGAAGGATTACTGATGTTACTTTTGTACTTGATGATGGGACTGGAAGGATTGACTGTAATAAATGGCTCCAGGAAGCTGTAGACACGAATGAAGCGGAGGGTATTAGGGATGGAATGTATGTGCGCTTACATGGGCATTTAAAAGGCTTTCAGGGAAGAAGGACATTAAATGTATTCTCTTTTAGGCCTTTGAACGACTTTAACGAGATTGCAAGCCACTTCATTGATTGCATATACGTCCATCTCTATAATACCAGGCTACGGAACACTGTCCCAATTCAGCAACATATGACCAATTCCACACCTATCATTCCCACAAATGGTTATCAAGCTGCCCCGTCAAATCAACACTCTAGTCAATACAACAATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATATCTTGCATCTTCCCACAAACAGGGCAAGGGATGAGGGTGTCCCTCGTGAACTTATTGCACAGCATCTTGGAATTCCGTTAGATAAGCTCATGTTATCCATCAAGAATCTTATTGAGGAAGGCGCCATATATGAAGCTATAGCCGATCATTATAAGTCAATTATCAATGGTTGA 822 0.4343 MYSSDFDGAAAFSGGGFMPSQATQGAEPSFYPSKNRDAQSLLPLTIKQINDAFLSSDDKSNMIIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIDCNKWLQEAVDTNEAEGIRDGMYVRLHGHLKGFQGRRTLNVFSFRPLNDFNEIASHFIDCIYVHLYNTRLRNTVPIQQHMTNSTPIIPTNGYQAAPSNQHSSQYNNGQKSVEDMVLDILHLPTNRARDEGVPRELIAQHLGIPLDKLMLSIKNLIEEGAIYEAIADHYKSIING 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0649 273 Pfam Replication protein A C terminal 163 265 IPR014892 -
Dere11g0649 273 Gene3D - 201 271 IPR036388 -
Dere11g0649 273 PANTHER REPLICATION PROTEIN A-RELATED 6 270 IPR040260 -
Dere11g0649 273 Pfam OB-fold nucleic acid binding domain 72 144 IPR004365 GO:0003676
Dere11g0649 273 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Dere11g0649 273 Gene3D - 33 168 IPR012340 -
Dere11g0649 273 PIRSF RPA32 1 271 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Dere11g0649 273 CDD RPA2_DBD_D 71 164 - -
Dere11g0649 273 SUPERFAMILY "Winged helix" DNA-binding domain 205 269 IPR036390 -
Dere11g0649 273 SUPERFAMILY Nucleic acid-binding proteins 41 168 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0649 Dere-ChrDere11 11206308 11210043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0649 1 221 Core DNA Replication Machinery Family AT3G02920 51.542 2.50e-79 238