Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0622 ATGGATCGGATCAAGGGTCCATGGAGCCCCGAAGAGGACGAGGCGTTGCAGAAGCTGGTAGAGAAACACGGACCCAGGAATTGGTCCTTGATCTCCAAGTCCCTTCCGGGTCGCTCCGGCAAGTCTTGCCGGTTCCGATGGTGTAATCAGCTTTCTCCTCAGGTGACAGCCCTCGCGGAGGAGCACAAGAGGTTTCAAAAAATTCTCCGCGACACAATAAAAAAAGAAGTAGAAGAGATTGCATCCAGCTTGATGAGGCAGAGCCACGTTTATAGGTATGACGTATTTTTGAGCTTCAGAGGTGAAGATACTAGGGGGTCTTTCACGTCACATCTCTATTCTTCTCTAATCAGTGCTGGAGTTATCGTTTTCAAAGACGATACTGAGCTGCCTAGGGGAAATCATATCTCAAAGGAACTGTCGCAAGCAATTGAAGGTTCTAGAATTTCAATCATCATCTTCTCTAGAGACTCTGCTGGTTCTAGATGGTGTCTCGACGAACTCTCGACAATCACGGAGCAACGCAGAGCAGAGGGTCAGGTGGTTCTGCCTGTGTTCTATGGCGTGGATCCGTCGGAAGTTCGTCGTCAAACCTCTAGTTTCGGAGAAGCATTTCAAGATCTTATACATAGAATCTCTCCCACAGAAGATGAAGTATTGAGGTGGAGGACAGCGCTCCATGAAGCAGGAGGCATTGCAGGGTTTGTTGTGCTTAATTCCAGGGATGAAAGTGAGGATATCAAGCATATTGTTGAGCATGTTTGTAATATACTGGACAAGAATGACTTGTTTGTCACTGACCATCCAGTTGGAGTGAACTCTCGCGTGCAAGATGTGATTAAAATGTTAGAAGACCATCTATCGAATGATGTTCTCATATTCGGGATATGGGGAATGGGAGGCATTGGCAAAACAACCATTGCCAAAGCCATATATAATGAAATCGGTCGCAAATTTGAGAGTAGAAGTTTTCTTTCAAATATCAGGGAAGTTTGGGAGAAAGATAATGGCCAAGTTTATTTACAAGAACAACTTCTTGCAGAAATCTTTAAAACAACAAAGATGACAATACAAAGCATTGACTCAGGAAAAAACATATTGAAGGAAAGACTTCGGCATAAGAGGGCACTTGTTGTACTTGATGATGTGAACAAGCTGGACCAATTAAATGCTTTATCTGGAAGTCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACAAGAGATGAACATATACTCAATATCCTAAAAGTGGACCATGTATATAGAATGAAATATATGGACAGCAATGAATCTGTTGAGCTTTTCTGTTGGCATGCATTTAAGCAACCAAGCCCTAGAGAAGAATTCATTGAACTTTCTAGAAATGTAGTTACTTATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGCTCCTATTTGTTTGATAGGGAAGTGACAGAGTGGAAGAGTGTATTGGAGAAACTAAAAAGAATCCCCAATTATGATATACAAAAGAAGCTAAAAATAAGCTTTGACGGTCTAAGTGATGATACGGAAAAAGAAGTATTCTTGGATATATCTTGCTTTTTTATTGGGATGGACAGAAATGATGTGTCACAAATATTGAATGGATGTGGATTTTTTGCAAACATTGGGATAAGTGTCCTTATGGAACGATGCCTTGTAACTATTGACCAGAAGAACAAGCTTGGTATGCATGATTTGCTGCGAGACATGGGAAGAGAAATAATTCGTGAAAAATCACCAAAAGAGCTTGGGGGTCGAAGTAGGCTATGGTTTCACAAGGATGTGCTTGATATACTATCAAAACATACAGTAAGAACCTTTCAAGTTTTTATTCTTTGGTTTAAAAAGTATAATAGCAATTGA 1881 0.4115 MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSLPGRSGKSCRFRWCNQLSPQVTALAEEHKRFQKILRDTIKKEVEEIASSLMRQSHVYRYDVFLSFRGEDTRGSFTSHLYSSLISAGVIVFKDDTELPRGNHISKELSQAIEGSRISIIIFSRDSAGSRWCLDELSTITEQRRAEGQVVLPVFYGVDPSEVRRQTSSFGEAFQDLIHRISPTEDEVLRWRTALHEAGGIAGFVVLNSRDESEDIKHIVEHVCNILDKNDLFVTDHPVGVNSRVQDVIKMLEDHLSNDVLIFGIWGMGGIGKTTIAKAIYNEIGRKFESRSFLSNIREVWEKDNGQVYLQEQLLAEIFKTTKMTIQSIDSGKNILKERLRHKRALVVLDDVNKLDQLNALSGSREWFGPGSRIIITTRDEHILNILKVDHVYRMKYMDSNESVELFCWHAFKQPSPREEFIELSRNVVTYSGGLPLALEVLGSYLFDREVTEWKSVLEKLKRIPNYDIQKKLKISFDGLSDDTEKEVFLDISCFFIGMDRNDVSQILNGCGFFANIGISVLMERCLVTIDQKNKLGMHDLLRDMGREIIREKSPKELGGRSRLWFHKDVLDILSKHTVRTFQVFILWFKKYNSN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0622 626 PRINTS Disease resistance protein signature 463 477 - -
Dere11g0622 626 PRINTS Disease resistance protein signature 293 308 - -
Dere11g0622 626 PRINTS Disease resistance protein signature 370 384 - -
Dere11g0622 626 SMART till_3 92 232 IPR000157 GO:0007165
Dere11g0622 626 Pfam Myb-like DNA-binding domain 5 51 IPR001005 -
Dere11g0622 626 CDD SANT 7 49 IPR001005 -
Dere11g0622 626 ProSiteProfiles TIR domain profile. 91 258 IPR000157 GO:0007165
Dere11g0622 626 Pfam TIR domain 93 256 IPR000157 GO:0007165
Dere11g0622 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 93 605 IPR044974 GO:0006952
Dere11g0622 626 Pfam NB-ARC domain 275 496 IPR002182 GO:0043531
Dere11g0622 626 Gene3D - 429 512 IPR042197 -
Dere11g0622 626 Gene3D - 261 423 IPR027417 -
Dere11g0622 626 SMART AAA_5 290 430 IPR003593 GO:0016887
Dere11g0622 626 Gene3D - 4 56 - -
Dere11g0622 626 FunFam MYB transcription factor 5 56 - -
Dere11g0622 626 SUPERFAMILY Toll/Interleukin receptor TIR domain 89 235 IPR035897 -
Dere11g0622 626 SUPERFAMILY "Winged helix" DNA-binding domain 499 605 IPR036390 -
Dere11g0622 626 SMART sant 4 53 IPR001005 -
Dere11g0622 626 SUPERFAMILY Homeodomain-like 5 55 IPR009057 -
Dere11g0622 626 FunFam Disease resistance protein (TIR-NBS-LRR class) 89 260 - -
Dere11g0622 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 523 IPR027417 -
Dere11g0622 626 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Dere11g0622 626 Gene3D - 89 260 IPR035897 -
Dere11g0622 626 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0622 Dere-ChrDere11 10875885 10879398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0622 93 596 WRKY Transcription Factor Family AT4G12020 32.411 2.43e-67 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere11g0622 NB-ARC 2.6e-33 CL0023