Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0621 ATGGATCGGATCAAGGGCCCATGGAGCCCCGAAGAGGACGAGGCGTTGCAGAAGCTGGTGGAGAAACACGGACCCAGGAATTGGTCCTTGATCTCCAAGTCCCTTCCGGGTCGCTCCGGCAAGTCTTGCCGGCTCCGATGGTGTAATCAGCTTTCTCCTCAGGTGGACCACCGACCATTCACGCCGGAAGAGGACGAGACTATTATTCGGGCTCATGCACGTTTCGGCAACAAATGGGCAACAATAGCCAGGCTTCTTTCGGGTCGAACCGAGAACGCCATCAAGAACCACTGGAACTCCACATTGAAATACAAACTTTATAGGTACGACGTGTTCTTGAGCTTCAGGGGTCAAGATACTCGAGCGTCTTTCACTTCACATCTCCACTCCTCTTTAAGCAATGCTGGAATTATTGTTTTCAAAGACGATTCTCAGCTTCCTAGGGGAAATCATATCTCAACAGAACTATCGCGAGGAATTAAAGGTTCTAGAATTTCAATCATCATCTTCTCTAGAGACTATGCTGGTTCTAGGTGGTGTCTCGACGAACTCTCGACAATCATGGAGCAACGCAGAGCAGAGGGTCAGGTGGTTCTGCCTGTGTTCTATGGCGTGGATCCGTCGGAAGTTCGTCGTCAAACCTCTAGTTTCGGAGAAGCATTTCAAGATCTTATACATAGAATCTCTCCCGCAGAAGATGAAGTATTGAGGTGGAGGACAGCGCTCCATGAAGCAGCAGGTATTGCAGGGTTTGTTGTGCTTAATTCCAGGGATGAAAGTGAGGATATCAAGAATATTGTTGAGCATGTTTGTAATATACTGGACAAGAATGACTTGTTTGTCACTGACCATCCAGTTGGAGTGAACTCTCGCGTGCAAGATGTGATTAAAATGTTAGAAGACCATCTATCGAATGATGTTCTCTTATTCGGGATATGGGGAATGGGAGGCATTGGCAAAACAACCATTGCCAAAGCCATATATAATGAAATCGGTCGCAAATTTGAGAGTAGAAGTTTTCTTTCAAATATCAGGGAAGTTTGGGAGAAAGATAATGGCCAAGTTTATTTACAAGAACAACTTCTTGCAGAAATCTTTAAAACAACAAAGATGACAATACAAAGCATCGACTCAGGAAAAAACATATTGAAGGAAAGACTTCGGCATAAGAGGGCACTTGTTGTACTTGATGATGTGAACAAGCTGGACCAATTAAATGCTTTATCTGGAAGTCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACAAGAGATGAACATATACTTAATATCCTAAAAGTGGACCATGTATATAGAATGAAATATATGGACAGCAATGAATCTGTTGAGCTTTTCTGTTGGCATGCATTTAAGCAACCAAGTCCTAGAGAAGAATTCAATGAACTTTCTAGAAACGTAGTTATTTACTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGCTCCTATTTGTTTGATAGGGAAGTGACAGAGTGGAAGAGTGTATTGGAGAAACTAAAAAGAATCCCCAATTATGATATACAAAAGAAGCTAAAAATAAGCTTCGACGGTCTAAGTGATGATACGGAAAAAGAAGTATTCCTTGATATATCTTGCTTTTTTATTGGGATGGACAGAAATGATGTGTCACAAATATTGAATGGATGTGGATTTTTTGCAGACATTGGGATAAGTGTCCTTGTGGAACGATGCCTTGTAACTGTTGACCAGAAGAACAAGCTTGGTATGCATGATTTGCTGCGAGACATGGGAAGAGAAATAATTCGTGAAAAATCACCAAAAGAGCTTGGGGGTCGAAGTAGGTTATGGTTTCACGAGGATGTGCTTGATGTAATATCAAAACATACAGGAACAAAAGCTATTGAGGGACTAGCTTTGAAGTTTTCACAAACCAATACAGTTTTGTGGAAGGAACCCCAGTTATTGGAGCGCCTTAAAATCCTCAATCTCAGCCACTCCCCTTACTTGAAGCATACTCCTGACTTTTCAAAACTTCCAAATCTGGAAAAGTTGATCCTTAAAGATTGTTCAAGGTTGTCTATGATTCATCATACCATTGGGCACCTTGATAAACTTCTTTTGGCAAATTTCAAGGATTGTGCTAGCCTTCGTAGTCTCCCAAGAAGTATTTATAAATTGAAATCTCTAAAAACTCTCATTCTTTCTGGTTGTTCAATGATTGAAAAGTTAGAGGAGGACCTAGAGCAAATGGATTCCTTGACAACTCTACTTGCTGATGACACTGCAATAACACAAGTGCCCTCTACATTGGGATTAACTCCCAGAAAGGGTGGTGATGATTGTGTTCTCCCTGGTGACAAATATCCCTATTGGCTAACTTTCAAGGGAGAAGGAGCTTCAGCAAAATTTAAAGTGCCTAGAGTTAATGGATGTAATTTGAAAGGAATGACTCTTTGTTGTGTGTATTTCCCATCAGGTGTTTGGGGCATCATGGCATTTGAATCTTTTATTAGTTTATTAATCATAAATTACACAAAGACGATCACTCTACTCTACAAGCGAGAGACAGTGACTTCATTTGGGGATGCAGAATGGAAGGGAATAATATCAAATCTAGAAGCAGATGATCAAGTGGAGGTGATTGCAGTTTTTGGGAATGGATTCACTGTGAAGAAGACAGCAGTGTACTTGATATATTATGAGTCATTTGATGAACAGATGGAGCATTCATCATCATCTACAGCTATAAATTTAAGAGGAGTCAAAAACAAGGAATGCATATGTGAGGAGGAGGAGGCAGGTCAATCTCTAAGACCCAGAAAGACAGTGAGAATGTGA 2826 0.4122 MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSLPGRSGKSCRLRWCNQLSPQVDHRPFTPEEDETIIRAHARFGNKWATIARLLSGRTENAIKNHWNSTLKYKLYRYDVFLSFRGQDTRASFTSHLHSSLSNAGIIVFKDDSQLPRGNHISTELSRGIKGSRISIIIFSRDYAGSRWCLDELSTIMEQRRAEGQVVLPVFYGVDPSEVRRQTSSFGEAFQDLIHRISPAEDEVLRWRTALHEAAGIAGFVVLNSRDESEDIKNIVEHVCNILDKNDLFVTDHPVGVNSRVQDVIKMLEDHLSNDVLLFGIWGMGGIGKTTIAKAIYNEIGRKFESRSFLSNIREVWEKDNGQVYLQEQLLAEIFKTTKMTIQSIDSGKNILKERLRHKRALVVLDDVNKLDQLNALSGSREWFGPGSRIIITTRDEHILNILKVDHVYRMKYMDSNESVELFCWHAFKQPSPREEFNELSRNVVIYSGGLPLALEVLGSYLFDREVTEWKSVLEKLKRIPNYDIQKKLKISFDGLSDDTEKEVFLDISCFFIGMDRNDVSQILNGCGFFADIGISVLVERCLVTVDQKNKLGMHDLLRDMGREIIREKSPKELGGRSRLWFHEDVLDVISKHTGTKAIEGLALKFSQTNTVLWKEPQLLERLKILNLSHSPYLKHTPDFSKLPNLEKLILKDCSRLSMIHHTIGHLDKLLLANFKDCASLRSLPRSIYKLKSLKTLILSGCSMIEKLEEDLEQMDSLTTLLADDTAITQVPSTLGLTPRKGGDDCVLPGDKYPYWLTFKGEGASAKFKVPRVNGCNLKGMTLCCVYFPSGVWGIMAFESFISLLIINYTKTITLLYKRETVTSFGDAEWKGIISNLEADDQVEVIAVFGNGFTVKKTAVYLIYYESFDEQMEHSSSSTAINLRGVKNKECICEEEEAGQSLRPRKTVRM 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0621 941 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Dere11g0621 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 277 539 IPR027417 -
Dere11g0621 941 Pfam Myb-like DNA-binding domain 59 101 IPR001005 -
Dere11g0621 941 Pfam Myb-like DNA-binding domain 5 51 IPR001005 -
Dere11g0621 941 SUPERFAMILY Toll/Interleukin receptor TIR domain 107 251 IPR035897 -
Dere11g0621 941 CDD SANT 7 49 IPR001005 -
Dere11g0621 941 SUPERFAMILY Homeodomain-like 2 98 IPR009057 -
Dere11g0621 941 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Dere11g0621 941 Gene3D - 59 104 - -
Dere11g0621 941 CDD SANT 59 102 IPR001005 -
Dere11g0621 941 Gene3D - 282 439 IPR027417 -
Dere11g0621 941 SUPERFAMILY L domain-like 585 767 - -
Dere11g0621 941 Pfam NB-ARC domain 291 512 IPR002182 GO:0043531
Dere11g0621 941 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 109 780 IPR044974 GO:0006952
Dere11g0621 941 SMART AAA_5 306 446 IPR003593 GO:0016887
Dere11g0621 941 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Dere11g0621 941 Pfam TIR domain 109 272 IPR000157 GO:0007165
Dere11g0621 941 FunFam Disease resistance protein (TIR-NBS-LRR class) 105 276 - -
Dere11g0621 941 Gene3D Ribonuclease Inhibitor 543 768 IPR032675 -
Dere11g0621 941 PRINTS Disease resistance protein signature 720 736 - -
Dere11g0621 941 PRINTS Disease resistance protein signature 309 324 - -
Dere11g0621 941 PRINTS Disease resistance protein signature 386 400 - -
Dere11g0621 941 PRINTS Disease resistance protein signature 479 493 - -
Dere11g0621 941 SMART sant 4 53 IPR001005 -
Dere11g0621 941 SMART sant 56 104 IPR001005 -
Dere11g0621 941 Gene3D - 105 281 IPR035897 -
Dere11g0621 941 ProSiteProfiles TIR domain profile. 107 274 IPR000157 GO:0007165
Dere11g0621 941 FunFam MYB transcription factor 5 56 - -
Dere11g0621 941 Gene3D - 4 56 - -
Dere11g0621 941 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Dere11g0621 941 Gene3D - 445 528 IPR042197 -
Dere11g0621 941 SMART till_3 108 248 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0621 Dere-ChrDere11 10837808 10849903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0621 651 766 WRKY Transcription Factor Family AT4G12020 35.345 2.91e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere11g0621 NB-ARC 3.5e-32 CL0023