Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0599 ATGGAAACGACTCTGCCACCAGGCTTCAGGTTTAATCCAACAGACCAAGAAGTGATTTGGCACTATCTGAACAAGAAGGTGAATGGTAAACCCCTTCCTAGTAATGCAATTATCGACTGTGACATCTACGGTGGCGATAATTCTTGGATGAAGATGTTTGAGGATAGGGAGGAGGAGTCACTTTACTTCTGCACCAAATTAAGAAATTGGAGCACAAAAAAGAAGGGTTCTTCTTCAAGGGCTGTGAGAGCAACAAAGTTTGGTACTTGGAAGTGTCAAGCTGATATGCCAATTCACATTGGGAAGAAACATATTGGGTCTAAGAGAACCTTCTCTTTCATAGAAAAGAAGGAAGAAGAGCCCAAAATCAAAGGATACAAGAAGGCAAATGGGTGGATAATGCATGAGTACAGACTTGATGGCTGCCTTCTAGGTCAAAAGGGAGCAACCTCTTCTGATTACGGTTATGTTATCTCCAAAATCAGTAGGCCGAGACACATGAGGAGACATGAAGGAGAATCAAGTAGCTTCCATATTGAGAGTGAACTTGAAGCATCACTTGTTGAAGAGCTAAATCAAGATAAGATATTTGGGGCTTTTGAGATGCTTCCGGACACATTTCTTGGAGTGAATACAAATGATGATTGGACACCATATTTTCTTGAAGCCCTCACTTATGATAATGCTGTACCTGTTGTACCTGTTGTTGATAGGAATGTGGTAAGGGTGATTGCTAGACTAATGGTTGTTTCTGCAAACCCTGTAGTTTCAGAAATGATCTAG 783 0.4112 METTLPPGFRFNPTDQEVIWHYLNKKVNGKPLPSNAIIDCDIYGGDNSWMKMFEDREEESLYFCTKLRNWSTKKKGSSSRAVRATKFGTWKCQADMPIHIGKKHIGSKRTFSFIEKKEEEPKIKGYKKANGWIMHEYRLDGCLLGQKGATSSDYGYVISKISRPRHMRRHEGESSSFHIESELEASLVEELNQDKIFGAFEMLPDTFLGVNTNDDWTPYFLEALTYDNAVPVVPVVDRNVVRVIARLMVVSANPVVSEMI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0599 260 ProSiteProfiles NAC domain profile. 5 164 IPR003441 GO:0003677|GO:0006355
Dere11g0599 260 Pfam No apical meristem (NAM) protein 6 139 IPR003441 GO:0003677|GO:0006355
Dere11g0599 260 Gene3D NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Dere11g0599 260 PANTHER NAC TRANSCRIPTION FACTOR 56 5 171 - -
Dere11g0599 260 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0599 Dere-ChrDere11 10343922 10345399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0599 5 161 NAC Transcription Factor Family AT5G07680 36.250 3.59e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere11g0599 NAM 2.9e-23 No_clan