Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0585 ATGGACAGAGCTTCCGAGTCACCTGGAAAACAGAAAAGGCCCTCTTTCTTCAAGGTATTGGTCCAGGATTTCTCTACCCGCTTGCAAATCCCACCGGCTTTCATCAAGAAATTTGCTGAACACTTGCCAAACAAAGCAATACTTGAGGCTTATTTGGATAAATCAACGGAAGTAGAAGTGGAAAAGCTAGGGAGAAAAGCTTATTTCAGCAAGGGATGGAGAGAATTTGTGGAAGATAATAATTTAGAACATGGCGATTTCTTGGTCTTCAAATACTTAGCAGATTTAAAATTATTCAAGATTACAGTCTATGGTAAAACATGCTGTGTGAAGCAACTTAATGAGAGGACTAAAGAACCTAAAGAAGATCAGAGAAGTGTACAAGATCAAGGAAAAAGAAAATGTGTTGAAGAGGATGATGATCTGAATAAAGATGAAGTTAAATGTGCAAGAAGGAATGGGAGTGAATTTAATCGATCTAAAGCTTGTGGAAGGAATGTAATCGTCAATGATTCTGATTCTTCTGATCATGATCAAATTGCATATACCAATAGGCTTTTTCAAAAAACATATGATGAAGGAAAACCAAGAGATCAAGTTTCAGATATCCAAGAAAATCTGGAGTATGGATCTTCAGGTGATGTATACAAACAAGGATTTCTTGGCCTAGCATTTCTGTGCACTGTTCACTCATATCATCTTGTAAAAGATTTGGAACTTCCAAGGCTCTTTTATCGTCAAAATTCAAATGCCCAGAAAGGTGAAGGTACACACCACAACCTCGCGATGGATTCGAACTCCTCTCCTTCAACCACGATATCTGTGAAGGGAACAATACCCGTTGCTTCAAACTTCGCTTCTCCTTCGAACAACCTTCCTCCTCCGGTCAATGCTTCCTCCAGTGATCGGAAACCCATCGCTCTGTGGCCGGGAATGTACCATTCGCCAGTGACAACCGCTCTGTGGGAAGCGAAGTCGAAGATCTTGGTAAAGCTGCTAGACCCACCGAAAGATGCGCCTCCGCAGAGTGAATTGCTTACGAAAACTCCTTCGCAGAGCAGGACAACTATCTTGTATAACTTCTCGTCGGATTTTGTACTGAGAGAGCAGTATAGGGATCCCTGGAATGAGGTGCGAATTGGAAAATTGCTTGAAGATCTTGACGCCTTAGCTGGAACCATTTCGGTCAAGCATTGTTCTGATGAGGATAGCACGACAAGGCCACTTTTACTGGTCACTGCTTCTGTAGACAAGATTGTGCTGAAGAAGCCCATTAGTGTTGACATTGATCTAAAAATAGTTGGTTCTGTTATATGGGTTGGGCGATCCTCAATCGAGGTTCAACTGGAGCTCACTCAGTCCAAAGAAGAGTGCTGTGATGCTACAGACTCAGTAGTACTAACAGCCAACTTCATATTTGTTGCACGGGACTCAAAAACTGGAAAGGCTGCTCCAGTTAATCGACTTTTAACAGAAACAGAACATGAAAAATTACTTTTTGAGCAATGTGAGGTAAGAAATAATTTGAAAAAAAGGAAAAGGGGAGGAGAGAGGAATGATTTGGAGAATGGAGAAGTAAATAGACTCAAGTCCCTATTGGCTGAGGGAAGAATTTTCTGTGACATGCCTGCCTTGGCTGACTGGGACAGCATTCTTCTGAGGGATACCCGCCTTGAGAACTCTTTACTATGCCAGCCTCAGCAACGGAACATCCTTGGCCGAATCTTTGGCGGATTTTTGATGCATCGAGCGTTTGAATTGGCTTTTTCAACTGCATATGCTTTTGCTGGATTGGTTCCTAGCTTTCTTGAAGTTGATTATGTTGATTTCTTAAAACCTGTTGACGTCGGGGACTTTTTGCGTTTCAAATCATGTGTTCTGTACACAGAACTGCACAATCCAGATCAGCCACTGATCAGTGTTGAAGTTGTTGCTCATGTTACTAGACCTGAGCTGCGGTCTAGCGAGGTATCCAATACTTTCTACTTCACTTTCACGGTACGTCCTGAGGCAAGGGCAATGAAAAATGGCTTTAAACTTCGAAAAGTGGTACCAGCAACAGAAGAAGAAGCTCGCCTAATATTAGAGCGCATGGATGCTGATACCCTGCAATGA 2115 0.4222 MDRASESPGKQKRPSFFKVLVQDFSTRLQIPPAFIKKFAEHLPNKAILEAYLDKSTEVEVEKLGRKAYFSKGWREFVEDNNLEHGDFLVFKYLADLKLFKITVYGKTCCVKQLNERTKEPKEDQRSVQDQGKRKCVEEDDDLNKDEVKCARRNGSEFNRSKACGRNVIVNDSDSSDHDQIAYTNRLFQKTYDEGKPRDQVSDIQENLEYGSSGDVYKQGFLGLAFLCTVHSYHLVKDLELPRLFYRQNSNAQKGEGTHHNLAMDSNSSPSTTISVKGTIPVASNFASPSNNLPPPVNASSSDRKPIALWPGMYHSPVTTALWEAKSKILVKLLDPPKDAPPQSELLTKTPSQSRTTILYNFSSDFVLREQYRDPWNEVRIGKLLEDLDALAGTISVKHCSDEDSTTRPLLLVTASVDKIVLKKPISVDIDLKIVGSVIWVGRSSIEVQLELTQSKEECCDATDSVVLTANFIFVARDSKTGKAAPVNRLLTETEHEKLLFEQCEVRNNLKKRKRGGERNDLENGEVNRLKSLLAEGRIFCDMPALADWDSILLRDTRLENSLLCQPQQRNILGRIFGGFLMHRAFELAFSTAYAFAGLVPSFLEVDYVDFLKPVDVGDFLRFKSCVLYTELHNPDQPLISVEVVAHVTRPELRSSEVSNTFYFTFTVRPEARAMKNGFKLRKVVPATEEEARLILERMDADTLQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0585 704 SMART B3_2 16 107 IPR003340 GO:0003677
Dere11g0585 704 ProSiteProfiles Hotdog acyl-CoA thioesterase (ACOT)-type domain profile. 357 479 IPR033120 -
Dere11g0585 704 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 362 512 IPR029069 -
Dere11g0585 704 FunFam Acyl-coenzyme A thioesterase 9, mitochondrial 359 527 - -
Dere11g0585 704 CDD B3_DNA 14 104 IPR003340 GO:0003677
Dere11g0585 704 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 553 695 IPR029069 -
Dere11g0585 704 CDD BFIT_BACH 361 487 - -
Dere11g0585 704 ProSiteProfiles B3 DNA-binding domain profile. 13 107 IPR003340 GO:0003677
Dere11g0585 704 Pfam B3 DNA binding domain 16 103 IPR003340 GO:0003677
Dere11g0585 704 ProSiteProfiles Hotdog acyl-CoA thioesterase (ACOT)-type domain profile. 554 671 IPR033120 -
Dere11g0585 704 FunFam Acyl-coenzyme A thioesterase 9, mitochondrial 545 704 - -
Dere11g0585 704 Gene3D Hotdog Thioesterase 360 514 - -
Dere11g0585 704 SUPERFAMILY DNA-binding pseudobarrel domain 11 109 IPR015300 -
Dere11g0585 704 Gene3D Hotdog Thioesterase 546 703 - -
Dere11g0585 704 PANTHER ACYL-COA THIOESTERASE 284 702 - -
Dere11g0585 704 Gene3D - 8 109 IPR015300 -
Dere11g0585 704 CDD BFIT_BACH 555 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0585 Dere-ChrDere11 9991275 10001981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0585 284 701 Acyl Lipid Metabolism Gene Families AT2G30720 63.895 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere11g0585 B3 6.5e-14 CL0405