Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0544 ATGAAAGTTTGCAGCGAGACACTCTGTGGTACACGCAGAGACAAAATGGCTGTACCTCTGCTTAGCAAGAAAATTGTAAAGAAGCGTGTCAAAAAGTTCAAGAGGCCTCAAAGTGACAGGAAAATCTCTGTTAAGCCCAACTGGCGAAGGCCAAAGGGTATTGATTCCCGTGTGAGGAGAAAGTTCAAAGGATGTACTTTGATGCCAAATATTGGTTATGGTTCAGACAAGAAGACCCGCCACTACCTCCCCAATGGATTCAAGAAATTTGTTGTGCACAATGTCAAGGAGCTGGAGCTTTTGATGATGCACAACAGGACTTACTGTGCTGAGATAGCGCACAACGTATCAACCAGGAAGAGGAAGGAGATCGTTGAGCGTGCAGCGCAGTTGGATGTTGTTGTTACCAACAGACTGGCCAGGCTGCGTAGTCAGGAAGACGAGTAA 447 0.4631 MKVCSETLCGTRRDKMAVPLLSKKIVKKRVKKFKRPQSDRKISVKPNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRLARLRSQEDE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0544 148 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 16 148 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere11g0544 148 CDD Ribosomal_L32_L32e 37 137 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere11g0544 148 SMART Ribosomal_L32e_2 30 137 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere11g0544 148 Pfam Ribosomal protein L32 31 137 IPR001515 GO:0003735|GO:0005840|GO:0006412
Dere11g0544 148 SUPERFAMILY Ribosomal protein L32e 15 146 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0544 Dere-ChrDere11 9199863 9203436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0544 16 148 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 87.970 9.97e-87 248