Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0528 ATGTCTTTTAGTAAAAATGGCCAAAATTCCGAGTATGGTGCTTTCTTTCCAAAAATAGTTGGGCCTGTAACCTCCTTCCTTTGGAGAGAGTTAGAGATACAGGAAAAAGGGACTGAGAAAACCACTTTACTTGGAGACCACAAAAATCTCAGATCTCTCTCGTCTCCTTTTGCAGCTCCGTCTTCTATGTCTCGACCACCAAACCACGAGTTTCAGGAATGGTGGAACAAGCAGAGAGAGAAAAACCATGACCCTTTTGAGGACAAACCCGACAGCTCCACTCGCTCTTTTCTCACCGTCGATATCCAAAGCGTCCCTTCCGATCATTCGGTGGAGAAGGAGCGTGCCCGTAGTGCCCGTCAGCTCTCCTGGCTCTGTCTACTGAGATTTCAGCAAATCGCCAGCTCTCTTGCTTGGATATACAATGGCTTCCTCTCATTACTCCGCACCGCCAACCGGCGGATTGCCTCGCCGGATTCGCGTTCCGATTCGGCGTCGTCGCGGCTTTATCGGGTGATCAAGGTGTTCTTGATTGTGGTTCTTCTGTTGCTGGTGTTTGAGCTTGTTGCTTACTTCAAAGGATGGCATTTCAGCCCGCCGTCAGCCCGGTCGGCGGACGTGTCGGGATTGATTGGTCTTATATATGCGAAATGGCTAGAGATTCGGGCAAATTACTTGGCGCCGCCATTGCAGAGCTTAACCAATATGTGCATTGTGCTCTTCCTGGTACAGTCGATTGATCGGGTGATTTTGATCTTGGGATGTTGCTGGATCAAATTCCGGCGGCTGAAGCCAGTGGCTGCCATAGAGTATCCAACAAATGCTAAGAATGAGGATGTGAATGTGGAGGATTATCCAATGGTCTTAGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAGCAATCTATTGCTGCAGTGTGTATCCTGGATTGGCCGAAAGACAGAATGCTTGTACAGGTCCTTGATGATTCTGATGAGGTAGATATCCAACATCTTATCATGGCCGAAGTACAGAAATGGCAACAAAGGGGTGTGCGAATAATATATAGACATCGTCTTATACGTACAGGCTATAAGGCAGGGAATCTTAAATCAGCAATGAATTGTGATTATGTTAAAGAATATGAGTTTGTGGCAATATTTGATGCTGATTTTCAGCCAGCACCAGATTTCTTGAAAAAGACAATACCTCATTTCAAGGGGAATGATGATTTGGCATTGGTCCAGACGCGATGGGCATTTGTAAACAAGGACGAGAACTTGCTTACAAGACTGCAAAACATAAATTTATCTTTCCACTTTGAGGTAGAACAACAGGTCAATGGTGTATTCATTAACTTCTTTGGTTTCAATGGAACCGCCGGTGTCTGGAGGATAAAGGCTCTTGAGGAGAGCGGTGGCTGGTTGGAACGAACTACTGTTGAGGACATGGATATTGCAGTTCGTGCTCATCTCTGTGGATGGAAGTTCATCTTTCTAAATGATGTTAAGTGCCTTTGTGAACTTCCTGAGACCTATGAAGCATATAAGAAGCAGCAACACCGCTGGCATTCCGGTCCAATGCAATTGTTTCGTTTGTGTTTTGTTGATATACTTCGTTCAAAGGTGAGTTTGGTCAAGAAGGCCAATTTGATATTCCTTTTCTTCCTCCTCAGGAAGCTTATTCTGCCATTTTATTCATTCACCCTTTTCTGCATCATTCTTCCATTGACCATGTTCCTTCCAGAAGCTGAGCTGCCGACCTGGGTTGTATGTTATGTTCCTGGAATCATGTCTGTTCTGAGTATTCTTCCATGTCCCCATTCCTTTCCGTTTATAGTGCCTTACCTTCTATTTGAGAATACTATGTCTGTTACTAAATTTAATGCTATGATATCGGGATTGTTTCGCTTTGGAAGTTCTTATGAGTGGGTGGTTACAAAGAAATTGGGAAGATCGTCAGAGACAGATCTGGTTGCACTTGAGAAGGAATCTGTGCCTCTAATGAGATCTACCAGTCTTCAGAGATCATCTTCTGATTCAGGCATTGAGGAGCTAAGCAAACTAGAACTGTCAAAGAAAACAGGGAAGGCTAAGAAAAATCGTTTGTACAGGAAAGAACTTGCTCTTGCATTTATATTATTAACTGCCTCAGTTAGAAGCTTATTATCAGCTCAAGGAATTCACTTTTATTTCCTGTTATTTCAAGGAATAAGCTTTCTGGTTATTGGCCTTGACTTGATAGGAGAGCAAGTTAGTTGA 2247 0.4375 MSFSKNGQNSEYGAFFPKIVGPVTSFLWRELEIQEKGTEKTTLLGDHKNLRSLSSPFAAPSSMSRPPNHEFQEWWNKQREKNHDPFEDKPDSSTRSFLTVDIQSVPSDHSVEKERARSARQLSWLCLLRFQQIASSLAWIYNGFLSLLRTANRRIASPDSRSDSASSRLYRVIKVFLIVVLLLLVFELVAYFKGWHFSPPSARSADVSGLIGLIYAKWLEIRANYLAPPLQSLTNMCIVLFLVQSIDRVILILGCCWIKFRRLKPVAAIEYPTNAKNEDVNVEDYPMVLVQIPMCNEREVYQQSIAAVCILDWPKDRMLVQVLDDSDEVDIQHLIMAEVQKWQQRGVRIIYRHRLIRTGYKAGNLKSAMNCDYVKEYEFVAIFDADFQPAPDFLKKTIPHFKGNDDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRSKVSLVKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPTWVVCYVPGIMSVLSILPCPHSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVALEKESVPLMRSTSLQRSSSDSGIEELSKLELSKKTGKAKKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGISFLVIGLDLIGEQVS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0528 748 SUPERFAMILY Nucleotide-diphospho-sugar transferases 285 565 IPR029044 -
Dere11g0528 748 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 214 745 - -
Dere11g0528 748 FunFam probable xyloglucan glycosyltransferase 5 278 504 - -
Dere11g0528 748 Pfam Glycosyl transferase family group 2 380 576 IPR001173 -
Dere11g0528 748 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 276 503 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0528 Dere-ChrDere11 8866419 8875626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0528 63 748 Miscellaneous Gene Families AT3G07330 77.180 0.0 1095