Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0523 ATGGCTGAACAAATTCCATACGGTGTGGTTGTTAATGTCATATGCAGGTTGGGTTCATTAGCCTTTAGAGAGATTGGATTGATCTGTGGGGTCGAGAATGAGATGGAAAGGCTTAAAGACACTGTCGAAGCCATCCAAGCAGTACTTGTTGATGCTGAGCAAAAGCAGCAGAATGATGAGCTCATCAAGCTTTGGGTAAAAAGGCTCAAAACAGTGCTTCACAAAGCTGATGACTTGCTGGATGAACTACTCACTGAAAATTTACTACACAAGAGAGATGGCAAAGGAAAGGTACGTGACTTCCTTTCACGCTCAAATCCAATTGCTTTTCGCCTCAAAATGGCTCATAAGATAAAGAAGATAAGAGAGGAATTTAATGCTATAGCAGAAGAGGTGTCCAAGCTGAATTTAGATCGAAGAGTTGTAGTAATGAGGGATAATGGGAGTAATTGGAGGGAAACTAGTTCTTTTGTGTATCAAGAGGATATCATTGGTAGGGAGGAAAGCAAGAAGGAGATTATCGATTTATTGTTAAATACTAATAGCAATCAAAATGTTTCCTTGGTTACTATTATTGGCATTGGGGGCTTAGGTAAGACTACTCTTGCACAGTTGGTGTACAATGATGCTAAAGTGAGGAAATTTTTCCAAAAGCAAATGTGGGTGTGTGTTTCTGAAGATTTTGATGTAAAATCACTTCTTAAAAGGATATTAGAATCACTAACTAACGACAAAGTGGATGACCTACAATTACAGTTGCTTCAAAACAAACTTCAAGAGAATTTGAGTGGCCAAAGATATTTGCTTGTTTTAGACGATGTCTGGAATGAGGTTCGTGAAAAGTGGATTCAATTAAATAAGTATTTGATGTGTGGTGCTGAAGGTAGTAAGATTTTGGTTACTACTCGAAATAAGACCGTAGCAAATACAATGGATGTGAAAACTCCATTTGTGTTAAAAGGTCTGACAGATGATCATTCTTGGGCTTTATTGAAAAGACTAGTATTTGGAGAAAATAGAATAATGACCCAGAACCTTGAGTCAATTGGCCAAAAAATTGCAAAGAAATGTGGGGGAGTTCCCCTGGCGATAAGAGCCATGGGAAGCATGTTGCAATCGAAAATAAAGGATAGTGATTGGGAAATGATTTTGGAAGGTGAATTTTGGAAGTTATCTGATGAAAATAATACGATCATGCCAATACTAAAGTTAAGCTATGATCACTTGTCAATTGAATTAAGACAATGTTTTGCTTATTGTTCTTTATATCCAAAAGATTGGGTGTTTGACAAGAATGATTTGATTCAATTGTGGATGGCGCAAGGCTACCTTAAATGTCAAAATGAAAATCAATGTCTAGAAGATGTTGGTGATCAATATGTTCATATTTTGTTGATGAGGTCATTCTTTCAAGATGTTGTGAGGACTAAATTTGGTGAATTAAAATATTTTAAAATGCATGATTTGATGCATGACCTCTCCATGTCAGTTGCTGGCTCTGATTGTTGCTTATATAGTGAGGACAGAAAAACTATTGCAAGCCCGATGCATGTTTTTTTGGAAGAATACAACCCCAAGTGTTCATTGGATATGTTGGAAGCAAGTAAATTGCGAACCATTCTTAATGCATTGGGAATATGGCAAGATGATCTAAGTAGTTTATTAAAGTTCAAATGTCTACGTAGTCTAGATTTGTCAGAGAATACAATGACAAATTTGCCAAAATCAATCAGTGAAATGAAGCATTTAAGATATCTTAGTCTCTCCCTTTGTGTCAAATTGATCAGTTTACCTAAAACTCTAAGCAACTTGGTCAATTTGCAAACACTGAAGCTGAATGGTTGCAAGAAACTTAAATTTTCTATCAAAGGTCTCACAAAGCTGATCAACTTGCGTCATCTTGAGATTAAGGGTTGTGAGGCCTTTGAAGGGGGGATGCCTGTTGGGTTGGGTAGATTGACAGCCCTTCAAAGTTTATCAAATTTCGTAGTGGGGGATGATAATGATAAAAGGAGAAAGAATGCCAAATTGAATGAATTGAAAGAACTCAACTTGAGACATGAATTAGATATTGAGAATCTCAGTTTAGTAAGTGATGTTGAGGGGGAGTCCGAGGAGATTAATTTGAAAGCAAAGAAATGCCTCAACTCCTTGAAACTATCTTGGGGGTATAATAAAGAAGTGAAAAATGATGATAGCTTACAACTTTTAGAAAACCTTTGTCCTCATCCAAATTTGAAAGAATTGATAGTGATATACTACCCCGGGGTGAGGTTATCAAGTTGGATATCATCACTTGCAAATCTTGTTCAATTATATATCTGTGGATGTCGAAATTGCCAACATTTGCCCGCGTTGGAAGGATTGGTTTCTCTGAAGACACTTTTAATACTGAATATGGATGCTTTGGAGTACATATGCTCTAATGGTTGTTCCTCATCAATTGCTGCCCACACAACTAACTTCTTCCCATCTTTGGAGAACTTACACATTGATCGGTGTGAAAATTTCAGGGGATGGCAAAGGGAGGCAAATGTCAATAATAGAATAGATGATGAGAACCATCATCACTCACTGCCTCAATTTCCTCGTCTTTCGGATTTAGGAATTAGAGGTTGTCCAAACTTGAGTTGCATGCCTACATTTCCAAATCTCGTGGAGTGCTTATCTTTGGCAGAGTGTAGCATGAAACCATTGATTAACACACTAGAGGTGAGCACAACTGGGTCGTCCGTAACAGAAGAATCAAATCCATCTCTTTCCAAGCTTCAGTTTCTACATATTAGAGGGATGGACATAGAAACTTTACCGGAGCAATGGATGCGGACTCTCACCTCTCTTAAACGTCTTCATATTGGCCGTTTATCAAGTCTAGCAACAGTGTTTCATCATATGCGACATCTACTTGCTACACTTGAAGAATTCTCTGTTAACAACATTGACAACCTTGATTCATGGAGTGGTGATAAGGATTTTAACGAACAATACCAAGTACTTTGTTGCCTCCATTCTCTCCAAAAATTCAATATTTGCTTTTGTGAAAGTCTCGAGGCTTTACCGGAGTGGATCTGTGATCTCCAATCACTTCAATTTATCGACATTTATAATTGTCCAAAGTTGGAGTCATTGCCTGAAGGAATGCATCGCCTTACTAATTTACAAACATTGGATCTAAGAAGTGCTCCACTTTTAGAGGAAAGATGCAAGAGAGGCACAGGTGTTGAATGGCCCAAAATTGCTCACATCCCAAATATAATGGTTAATGGATGTCGAATCTGA 3279 0.3766 MAEQIPYGVVVNVICRLGSLAFREIGLICGVENEMERLKDTVEAIQAVLVDAEQKQQNDELIKLWVKRLKTVLHKADDLLDELLTENLLHKRDGKGKVRDFLSRSNPIAFRLKMAHKIKKIREEFNAIAEEVSKLNLDRRVVVMRDNGSNWRETSSFVYQEDIIGREESKKEIIDLLLNTNSNQNVSLVTIIGIGGLGKTTLAQLVYNDAKVRKFFQKQMWVCVSEDFDVKSLLKRILESLTNDKVDDLQLQLLQNKLQENLSGQRYLLVLDDVWNEVREKWIQLNKYLMCGAEGSKILVTTRNKTVANTMDVKTPFVLKGLTDDHSWALLKRLVFGENRIMTQNLESIGQKIAKKCGGVPLAIRAMGSMLQSKIKDSDWEMILEGEFWKLSDENNTIMPILKLSYDHLSIELRQCFAYCSLYPKDWVFDKNDLIQLWMAQGYLKCQNENQCLEDVGDQYVHILLMRSFFQDVVRTKFGELKYFKMHDLMHDLSMSVAGSDCCLYSEDRKTIASPMHVFLEEYNPKCSLDMLEASKLRTILNALGIWQDDLSSLLKFKCLRSLDLSENTMTNLPKSISEMKHLRYLSLSLCVKLISLPKTLSNLVNLQTLKLNGCKKLKFSIKGLTKLINLRHLEIKGCEAFEGGMPVGLGRLTALQSLSNFVVGDDNDKRRKNAKLNELKELNLRHELDIENLSLVSDVEGESEEINLKAKKCLNSLKLSWGYNKEVKNDDSLQLLENLCPHPNLKELIVIYYPGVRLSSWISSLANLVQLYICGCRNCQHLPALEGLVSLKTLLILNMDALEYICSNGCSSSIAAHTTNFFPSLENLHIDRCENFRGWQREANVNNRIDDENHHHSLPQFPRLSDLGIRGCPNLSCMPTFPNLVECLSLAECSMKPLINTLEVSTTGSSVTEESNPSLSKLQFLHIRGMDIETLPEQWMRTLTSLKRLHIGRLSSLATVFHHMRHLLATLEEFSVNNIDNLDSWSGDKDFNEQYQVLCCLHSLQKFNICFCESLEALPEWICDLQSLQFIDIYNCPKLESLPEGMHRLTNLQTLDLRSAPLLEERCKRGTGVEWPKIAHIPNIMVNGCRI 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0523 1092 Gene3D - 321 405 IPR042197 -
Dere11g0523 1092 Gene3D - 406 496 IPR036388 -
Dere11g0523 1092 CDD RX-CC_like 7 124 IPR038005 -
Dere11g0523 1092 Pfam Rx N-terminal domain 10 95 IPR041118 -
Dere11g0523 1092 SUPERFAMILY L domain-like 470 1080 - -
Dere11g0523 1092 FunFam Probable disease resistance protein At1g61300 145 316 - -
Dere11g0523 1092 Gene3D - 10 119 - -
Dere11g0523 1092 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
Dere11g0523 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Dere11g0523 1092 Coils Coil 677 697 - -
Dere11g0523 1092 PANTHER DISEASE RESISTANCE PROTEIN RP 35 852 IPR044974 GO:0006952
Dere11g0523 1092 FunFam Probable disease resistance protein At1g63360 406 496 - -
Dere11g0523 1092 PRINTS Disease resistance protein signature 261 275 - -
Dere11g0523 1092 PRINTS Disease resistance protein signature 357 371 - -
Dere11g0523 1092 PRINTS Disease resistance protein signature 602 618 - -
Dere11g0523 1092 PRINTS Disease resistance protein signature 188 203 - -
Dere11g0523 1092 Coils Coil 35 55 - -
Dere11g0523 1092 Gene3D - 150 318 IPR027417 -
Dere11g0523 1092 Coils Coil 66 86 - -
Dere11g0523 1092 Coils Coil 118 138 - -
Dere11g0523 1092 Gene3D Ribonuclease Inhibitor 902 1083 IPR032675 -
Dere11g0523 1092 Gene3D Ribonuclease Inhibitor 668 897 IPR032675 -
Dere11g0523 1092 Gene3D Ribonuclease Inhibitor 524 662 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0523 Dere-ChrDere11 8752934 8756212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0523 185 417 WRKY Transcription Factor Family AT5G45050 25.806 2.02e-07 53.5