Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0522 ATGGCTCAACAAATTCCATATGGTGTGGTTGTTAATGTCATAAGCAGGTTGGGTTCATTAGCCTTTAGAGAGATTGGATTGATCTATGGGGTCGAGAATGAGTTGGAAAGGCTTAAAGACACTGTCGAAGCCATCAAAGCTGTGCTTGTTGATGCTGAGCTAAAGCAGCAGAATGATGAGCTCGTCAAGCTTTGGGTAAAAAGGCTCAAAACAGTGCTTCACAAAGCTGATGACTTGCTGGATGAACTACACACTGAAAATTTACTACACAAGAGAGATGGCAAAGGAAAGGTACGTGACTTCCTTTCATGCTCAAATCCAATTGCCTTTCCCCTCAAAATGGCTCATAAGATGAAGAAGTTAAGAGAGGAATTTAATGCTATAGCAGAAGAGGTATCCAAGCTGAATTTAGATCGAAGAGTTGTAGTAATGAGGGATAATGGGAGTAACTGGAGGGAAACTAGTTCTTTTGTGTATCAAGAGGATATCATTGGTAGGGAGGAAAGCAAGAAGGAGATTATCGATTTATTGTTAAATACTAATAGCAATCAAAATGTTTCCTTGGTTGCTATTATTGGCATTGGGGGTTTAGGTAAGACTACTCTTGCACAGATGGTGTACAATGATGCTAAAGTGAAGAAATTTTTCCAAAAGCAAATGTGGGTGTGTGTTTCTGAAGATTTTGATGTAAAATCACTTCTTAAAAGGATATTAGAATCACTAACTAACGACAAAGTGGATGACCTACAATTACAGTTGCTTCAAAACAAACTTCAAGAGAATTTGAGTGGCCAAAGATATTTGCTTGTTTTAGACGATGTTTGGAATGAGGTTCGTGAAAAGTGGCTTCAATTAAATAAGTATTTGATGTGTGGTGTTGAAGGTAGTAAGATTTTGGTTACTACTCGAAATAAGACCGTAGCAAATACAATGGATGTGAAAACTCCATTTGTATTAAAAGGTCTGACAGATGATCAATCTTGGACTTTGTTGAAAAGATTAGCATTTGGAGAAGAAGAAATAATGTCCCAGAACCTTAAGTCAGTTGGCCAAAAAATTGCAAAGAAATGTGGAGGAGTTCCCCTAGCGATAAGAGCCATGGGAAGCACGTTGCATTGGAAAACAGAGGAAAGTGATTGGGAAATGATTTTGGAAGGTGAATTTTGGAAGTTATCTGATGAAAATAATACGATCATGCCAGTACTAAAATTAAGCTATGATCACTTGTCAATAGAATTAAGACAATGTTTTGCTTATTGTTCCTTGTATCCAAAAGATTGGAGGTATAATAAGAATGATTTGATTCAATTGTGGATGGCGCAAGGCTACCTTAAATGTCAAAATGAAAATCAATGCCCAGAAGATGTTGGTGATCAATATGTTCATATTTTGTTGATGAGGTCCTTCTTCCAGGATGTTGAGATGAATGCATTTGGTGAAATAAAATATTTTAAAATGCATGATTTGATGCATGACCTCTCCATGTCAGTTGCTGGCTCTGATTGTTGCTTATATAGTGAGGACAGAAAAACTATTGCAAGCCCTATTCATGTTTTTTTGGAAGAATACAACCCCAAGTGTTCATTGGATATGTTAGAAGCAAGTAAATTGCGAACCATTCTTAATGCATCGAGAATACGGCAAGATGGTCTATGTAGTTTATTAAAGTTCAAATGTCTACGTAGTCTAGATTTGTCAGGGAATACAATGACAGATTTGCCAAAATCAATCGGTGAAATGAAGCATTTAAGGTATCTTGATCTCTCCTCTTGTTACGGATTGACCAATTTACCTCAAACTCTAAGCAACCTGGTCAATTTGCATACACTGAAACTGAATGATTGCGTAAATCTTAAATTTTCTATCAAAGGTCTCCAAAAGCTGATCAACTTGCATCATCTTGAGATTAATGGTTGTGAGGCCTTCAAATGGGGGATGCCTGTTGGGTTGGATAGACTGACAGCCCTTCAACGTTTATCAAATTTCATAGTGGGCAATGATAATGATAATAAGGGGAGAATGAATGCCAAATTGAATGAATTGAAAGAACTCAACTTGAGACATGAATTAGATATTGAGAATCTCAATTTAGTAAGGGATGTTGAGGGGGAGTCCAAGGAGATTAATTTGAAAGCAAAGAAATGGCTCAAGTCCTTGAAACTATCTTGGGGGTATAATAAAGAAGTGAAAAATGATGATAGCTTACAACTTTTTGAAAACCTTTGTCCTCATCCAAATTTGAAACAATTGCGAGTGGAATACTACCCCGGGGTGAGGTTTTCAAGTTGGATATCATCACTGGCAAATCTTGTTGAATTAAAAATCTATGGATGTCGAAATTGCCAACATTTGCCCGCGTTGGAAGGATTTGTTTCTCTGAAGACACTTGAGATATGGGTTATGGATGCTTTGGAGTACATATACTATGATGGCTGTTCCTCATCAATGGTTGCCCACACAACTAACTTCTTCCCATCTTTAGAGAGCTTAAAACTTCTTCGGTGTGAAAATTTCAAGGGATGGCAAAGGGAGGCAAATGTTAATAATAGAATAGATGATGAGAACCATCATCACTCACTGCCTCAATTTCCTCGTCTTTCGAAGTTGGAAATTAGAGGTTGTCCAAACTTGAGTTGCATGCCTACATTTCCAAATCTCGTGGAGGCCTTACATTTGAGTGAGTGTAGCACGAAACCATTGATTGACACACTAGAGGTGAGCACAACTGGGTCGTCCGTAACAGAAGAATCAAATCCATCTCTTTCCAAGCTTCAGTATCTACAAATTGATGGGATGGACATAGAAACTTTGCCAGAGAAATGGACGCGGAATCTCACCTCTCTTAAATGTCTTGATATTAACGGTTTATCAAATCTAGCAACTGTGTTTCATCATATGTGA 2901 0.3764 MAQQIPYGVVVNVISRLGSLAFREIGLIYGVENELERLKDTVEAIKAVLVDAELKQQNDELVKLWVKRLKTVLHKADDLLDELHTENLLHKRDGKGKVRDFLSCSNPIAFPLKMAHKMKKLREEFNAIAEEVSKLNLDRRVVVMRDNGSNWRETSSFVYQEDIIGREESKKEIIDLLLNTNSNQNVSLVAIIGIGGLGKTTLAQMVYNDAKVKKFFQKQMWVCVSEDFDVKSLLKRILESLTNDKVDDLQLQLLQNKLQENLSGQRYLLVLDDVWNEVREKWLQLNKYLMCGVEGSKILVTTRNKTVANTMDVKTPFVLKGLTDDQSWTLLKRLAFGEEEIMSQNLKSVGQKIAKKCGGVPLAIRAMGSTLHWKTEESDWEMILEGEFWKLSDENNTIMPVLKLSYDHLSIELRQCFAYCSLYPKDWRYNKNDLIQLWMAQGYLKCQNENQCPEDVGDQYVHILLMRSFFQDVEMNAFGEIKYFKMHDLMHDLSMSVAGSDCCLYSEDRKTIASPIHVFLEEYNPKCSLDMLEASKLRTILNASRIRQDGLCSLLKFKCLRSLDLSGNTMTDLPKSIGEMKHLRYLDLSSCYGLTNLPQTLSNLVNLHTLKLNDCVNLKFSIKGLQKLINLHHLEINGCEAFKWGMPVGLDRLTALQRLSNFIVGNDNDNKGRMNAKLNELKELNLRHELDIENLNLVRDVEGESKEINLKAKKWLKSLKLSWGYNKEVKNDDSLQLFENLCPHPNLKQLRVEYYPGVRFSSWISSLANLVELKIYGCRNCQHLPALEGFVSLKTLEIWVMDALEYIYYDGCSSSMVAHTTNFFPSLESLKLLRCENFKGWQREANVNNRIDDENHHHSLPQFPRLSKLEIRGCPNLSCMPTFPNLVEALHLSECSTKPLIDTLEVSTTGSSVTEESNPSLSKLQYLQIDGMDIETLPEKWTRNLTSLKCLDINGLSNLATVFHHM 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0522 966 CDD RX-CC_like 7 124 IPR038005 -
Dere11g0522 966 PRINTS Disease resistance protein signature 578 594 - -
Dere11g0522 966 PRINTS Disease resistance protein signature 261 275 - -
Dere11g0522 966 PRINTS Disease resistance protein signature 188 203 - -
Dere11g0522 966 PRINTS Disease resistance protein signature 357 371 - -
Dere11g0522 966 SUPERFAMILY L domain-like 485 840 - -
Dere11g0522 966 Pfam Rx N-terminal domain 9 94 IPR041118 -
Dere11g0522 966 SUPERFAMILY RNI-like 824 958 - -
Dere11g0522 966 Gene3D - 406 496 IPR036388 -
Dere11g0522 966 Gene3D Ribonuclease Inhibitor 842 964 IPR032675 -
Dere11g0522 966 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
Dere11g0522 966 Gene3D Ribonuclease Inhibitor 529 841 IPR032675 -
Dere11g0522 966 Pfam Leucine Rich repeats (2 copies) 559 598 IPR025875 -
Dere11g0522 966 Coils Coil 678 698 - -
Dere11g0522 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Dere11g0522 966 FunFam Probable disease resistance protein At1g61300 146 316 - -
Dere11g0522 966 Gene3D - 150 318 IPR027417 -
Dere11g0522 966 Coils Coil 35 55 - -
Dere11g0522 966 PANTHER DISEASE RESISTANCE PROTEIN RP 35 874 IPR044974 GO:0006952
Dere11g0522 966 Coils Coil 66 86 - -
Dere11g0522 966 Coils Coil 118 138 - -
Dere11g0522 966 Gene3D - 321 405 IPR042197 -
Dere11g0522 966 Gene3D - 10 124 - -
Dere11g0522 966 FunFam Probable disease resistance protein At1g63360 406 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0522 Dere-ChrDere11 8731237 8734137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0522 185 417 WRKY Transcription Factor Family AT5G45050 25.806 1.57e-08 57.0