Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0521 ATGGGAGCCACCGGCACTGGGAAATCTGGGCTCTCCATCGACTTCGCCACCTGTTTTCCTGCAGAAATCATCAACTCCGATAAAATGAAAGTCTACGAAGGCCTTGACATAGTCACGAACAAAATCCCCAAGGAAAAGCAACGTGGGGTACCTCACCAATTGCTGGGAACACAGAGCCCCAATTCAGAGTTTACAGCCACTAACTTCTATAACACCGCCTCACTTGCCATTGAGTCAATTACGAGTCGTGGGCGGCTTCAGATCATGTTCGAAGGGTCCAACTCGAATATTGTGGCACTAATCAACGACGATGATTACAAATTCCAATTGAAGTATGATTTCTGTGGTCTCTGGGTAGACGTGTCAATGTCTGTTCTTCATCGATATGTGGCGGAGCGAGTTGATCGAATGTTAGAGCATGGAATGGTGGATGAACTGAGATCCTTTTTCAATCACGATGTAGATTACTTGTGA 474 0.4599 MGATGTGKSGLSIDFATCFPAEIINSDKMKVYEGLDIVTNKIPKEKQRGVPHQLLGTQSPNSEFTATNFYNTASLAIESITSRGRLQIMFEGSNSNIVALINDDDYKFQLKYDFCGLWVDVSMSVLHRYVAERVDRMLEHGMVDELRSFFNHDVDYL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0521 157 Pfam IPP transferase 109 151 - -
Dere11g0521 157 Pfam IPP transferase 31 102 - -
Dere11g0521 157 Gene3D - 1 122 IPR027417 -
Dere11g0521 157 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 123 153 - -
Dere11g0521 157 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 152 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0521 Dere-ChrDere11 8725295 8725768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0521 81 156 C2H2 Transcription Factor Family AT2G27760 31.169 2.86e-06 44.3