Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0520 ATGAGTTCGACGAAGGCAGCTTCTATTTTTCTCTTCTTCCTTCTTATTTCGCTCCTAGCTTCTGCTAAGTCCCGTGAGGTAACAGAGTTACGGATTGGTGTGAAGCATAAGCCAACAACATGTGAAGTTCAGGCACACAAAGGTGACAGAGTCAAAGTGCATTATCGGGGAAAACTTACTGATGGAACTGTTTTTGATTCCAGCTTTGAAAGAGATAGCCCAATTGAATTTGAGCTTGGTACCGGTCAAGTGATAAAAGGCTGGGACCAAGGATTATTGGGAATGTGTCTAGGTGAGAAGCGGAAGTTACAAATACCAGCAAAACTTGGCTATGGAGAGCAGGGTTCCCCTCCTACTATTCCCGGTGGTGCAACACTCATATTTGACACTGAACTCGTAGGAGTGAATGGGAAAACTTTAAGTGAAGAAAAATCAAACACCGAGCTTTAG 450 0.4356 MSSTKAASIFLFFLLISLLASAKSREVTELRIGVKHKPTTCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERDSPIEFELGTGQVIKGWDQGLLGMCLGEKRKLQIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNGKTLSEEKSNTEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0520 149 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 48 136 IPR001179 GO:0003755
Dere11g0520 149 PANTHER PEPTIDYLPROLYL ISOMERASE 10 138 IPR044609 GO:0000413|GO:0003755|GO:0061077
Dere11g0520 149 FunFam Peptidylprolyl isomerase 16 136 - -
Dere11g0520 149 Gene3D - 16 136 IPR046357 GO:0003755
Dere11g0520 149 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 42 133 IPR001179 GO:0003755
Dere11g0520 149 SUPERFAMILY FKBP-like 36 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0520 Dere-ChrDere11 8717761 8722783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0520 49 142 Calmodulin-binding Proteins AT3G25230 34.343 1.90e-06 44.3