Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0517 ATGGAAAGATACAAAATTTTGAGAGAGCTTGGAGATGGTTCTTGTGGTCATGTATATAAGGCTCGTGATTTGAGGACATATGAGATTGTTGCTGTCAAAAAGTTGAAAAGAAAGTTCTATTTCTGGGAAGAATATACAAATTTAAGAGAAATCAAGGCCCTCCGGAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTGTCAGGGAAAATAATGAACTGTTTTTCATATTTGAATACATGGATTATAATCTCTATCAATTAATAAAAGACAGACAAAAGCCCTTTTCAGAGGAAGAGATACGTTCCTTTATGAAGCAAGTGCTGCTAGGTCTTAGTCACATGCACAAGAAAGGATTCTTTCATCGGGATTTGAAACCTGAGAATTTGCTGGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGACTGGCTAGAGAGGTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGTTGGTATCGAGCTCCAGAAGTCTTGTTGCAGTCCCCATGTTATACTCCAGCTGTTGACATGTGGGCGGCTGGTGCTATATTAGCTGAGCTTTTTACCTTGACCCCCATATTCCCTGGTGAAAGTGAAATAGATCAACTGTACAAGATATACTGTGTTCTTGGTACACCAGATTTGAGTGCTTTCCCTATAGGGGCAAACAACTCTAGGCTATTAGACCTTGTTGGTCATGAAGTGGTTCCACCTTCAAAGCTTTCTGACATAATTCCTAATGCTAGCTTGGATGCTGTAGATTTGATCACGCAACTGTTATCATGGGACCCATCAAGAAGGCCAGATGCAGATCAAGCACTTCAGCATCCTTTTTTCCATGTAAATACGTGGGTTCCTTGTCCAATCGGTGATCCGCTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAACCAAATCTTGAGCTTAAACTGCAGGATTTTGGCCCTGACCCCGATGACTGTTTTCTTGGCTTAACATTAGCTGTAAAGCCCAGCATTTCAAACTTGGATGTGGCCCACAATGTATCACAAGGTATGGGAGAGAATATGTTGTTTTGCTCGGAGTTCAGTGATCATTCAGACCAGTCAGTTTTTTGGACATTGTTATCTCCGGATCAAAATGGAGTTCACTCCTCAGCAGAAACTTCTTTGTCATTGTCTTTTGGTTCAATTCAGCACCAACCAATTGGAGTCCCGCAGTCAACAGGGTTCTCCTTTCAGCCTTTGCAGCCTAACATTTTAACTCCACCATTTTTGGCTCTGTCTTCCCCTTTCCAGCGAGGGCACTGCCTTTAG 1308 0.4144 MERYKILRELGDGSCGHVYKARDLRTYEIVAVKKLKRKFYFWEEYTNLREIKALRKMNHPNIIKLKEVVRENNELFFIFEYMDYNLYQLIKDRQKPFSEEEIRSFMKQVLLGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAAGAILAELFTLTPIFPGESEIDQLYKIYCVLGTPDLSAFPIGANNSRLLDLVGHEVVPPSKLSDIIPNASLDAVDLITQLLSWDPSRRPDADQALQHPFFHVNTWVPCPIGDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSISNLDVAHNVSQGMGENMLFCSEFSDHSDQSVFWTLLSPDQNGVHSSAETSLSLSFGSIQHQPIGVPQSTGFSFQPLQPNILTPPFLALSSPFQRGHCL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0517 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Dere11g0517 435 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0517 435 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 308 - -
Dere11g0517 435 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Dere11g0517 435 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Dere11g0517 435 CDD STKc_MAK_like 4 284 - -
Dere11g0517 435 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0517 435 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Dere11g0517 435 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Dere11g0517 435 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0517 435 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0517 Dere-ChrDere11 8684527 8695617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0517 1 310 Core Cell Cycle Gene Families AT1G66750 40.498 1.25e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Dere11g0517 Pkinase 3e-75 CL0016