Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0516 ATGAAATATGAAATATATCAGAGTGAACTATACACGCAAGCCATCCCACAAATTAGTATAAATAGAGTAATAGATCGACCTCCAAGTCCAGTACACATTTTCTCTCATATTACAGCCATGGATCTTCCTTCTTCTTCCTGTTATGTCACTGGAGTCCTCATAGCTCTGTTCTTCGTGCTTGCCTCCATTGTTGTATCAATCGGTACTGTGAAGAAAAGAAGCAGCAAGGTGAAGAAAGCTCCACAACCCTATGGAGCTTTGCCTCTGATAGGGCACCTCCATCTTCTTCGCGGTGAAGTTCCGATCTTTCGGACGCTGTCGGCCATGGCGGAGAAGCATGGATCCGTCTTCTCCCTCAGGCTGGGCTTCCACACCACCTTGATTGTGAGCAGCAGAGAGATCGCCAGAGAATGCCTCGCCACCATCGACAAGGTCTTCGCCACCAGGCCGAACATCGCCGCAGGAAGATACATAGGGTACAACAACGCCATCTTCGCTCTTGCCCCTTATGGAGAATACTGGAGAGAGATGAGAAAAATAGCCACACTCGAGCTTCTTTCAACTCACAGGCTTGAACAGCTCAAGCATGTAAGAGAATCAGAGATTTATTCTCTGGTGAAGAATCTGTACTTAACCCATCAAAGCAAAAAGATCAGCAATAATGATTTCATTGAGGTGCCTATGAGCAAGCTCTTAGAGCACTTGACCTTCAACATCAACGTCAGGTTAATTGCAGGCAAGAGATTCTCAGGCGATGAGAAAACCATAAGCGACGAAGAGAGCGAGGCTGGGAGGTTGAAGAGGGCAGTGAAGGACGCCACATATTTAAGTGGAGTATTTACAGAGGCCGACGCATTGCCCATGGCCATTCATGACTGGGTTGACTTTCAGGGATACTTGAGGCTCATGAAGAAGACAGGGAAGGAGATAGACTCTGTGCTTCACTTGTGGCTGCAAGAGCACCTCGCAAAAGCAGCCCATCCTGATGGTGACAGCCCTCCAAACGACTTCATGGATGTTCTCATTTCCACTTTTGGAGATGAAGCTCAGATTTGTGGCCATGAGCGAGACACAGTCATCAAGGCTACGGCTCTGATTCTTATCCTTACAGGCACAGGAAGCACAGCTATGACCCTAACATGGATACTTTCATTGCTCCTAAACCATCCAAACGTCCTCAGAAAAGCCCAAGAGGAGCTTGACACCTACATAGGCAAACACAAATGGGTACAAGAATCTGACATTAAACACCTTCACTACCTTCAAGCTATCACCAAAGAGACTCTTCGTCTATACCCACCAGCTCCCTTAACTGGAATCAGAGAGGCCATGGAAGACTGCTTCGTTGGAGGCTACTACGTCCCCAAAGGCACTCGTCTTCTCATTAACATCTGGAAGCTTCAAAGGGACCCGCAAGCATGGGAAAACCCTAATGAGTTCAAGCCTGAGAGGTTCATTGAAGGTCACAGTAAAGATATTGACTTTAGGGGTCAGAATTTTGAGTACATTCCTTTCAGCTCTGGAAGAAGGTCGTGTGCTGGCATGACCTTTGGCCTGCAAGTTGTGAACTTGACACTGGCTCGATTGCTTCAAGGATTTGATCTGTCCACGAGAGGTGGTGTTGTGGTGGACATGAGTGAAGGACTAGGGGTGGCTTTGCCTAAGCTTCATCCTCTTAAAGTTATGCTCAAGCCTCGTCTTCCTCTTGAGCTTTATCAGCAGCTTTGA 1728 0.4722 MKYEIYQSELYTQAIPQISINRVIDRPPSPVHIFSHITAMDLPSSSCYVTGVLIALFFVLASIVVSIGTVKKRSSKVKKAPQPYGALPLIGHLHLLRGEVPIFRTLSAMAEKHGSVFSLRLGFHTTLIVSSREIARECLATIDKVFATRPNIAAGRYIGYNNAIFALAPYGEYWREMRKIATLELLSTHRLEQLKHVRESEIYSLVKNLYLTHQSKKISNNDFIEVPMSKLLEHLTFNINVRLIAGKRFSGDEKTISDEESEAGRLKRAVKDATYLSGVFTEADALPMAIHDWVDFQGYLRLMKKTGKEIDSVLHLWLQEHLAKAAHPDGDSPPNDFMDVLISTFGDEAQICGHERDTVIKATALILILTGTGSTAMTLTWILSLLLNHPNVLRKAQEELDTYIGKHKWVQESDIKHLHYLQAITKETLRLYPPAPLTGIREAMEDCFVGGYYVPKGTRLLINIWKLQRDPQAWENPNEFKPERFIEGHSKDIDFRGQNFEYIPFSSGRRSCAGMTFGLQVVNLTLARLLQGFDLSTRGGVVVDMSEGLGVALPKLHPLKVMLKPRLPLELYQQL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0516 575 CDD CYP82 114 566 - -
Dere11g0516 575 PRINTS E-class P450 group I signature 134 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 463 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 422 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 379 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 502 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 359 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS E-class P450 group I signature 512 535 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS P450 superfamily signature 503 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 PRINTS P450 superfamily signature 370 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 SUPERFAMILY Cytochrome P450 81 566 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 Pfam Cytochrome P450 81 555 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 505 514 IPR017972 GO:0005506|GO:0016705
Dere11g0516 575 Gene3D Cytochrome P450 69 567 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere11g0516 575 FunFam Cytochrome P450 82C4 70 564 - -
Dere11g0516 575 PANTHER CYTOCHROME P450 82C3-RELATED 58 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0516 Dere-ChrDere11 8650659 8656702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0516 80 572 Cytochrome P450 AT4G31940 48.089 3.42e-164 476