Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere11g0500 | ATGTATTCTGATCGGGTGGAGAGTGGGGCCAGGAGGTCAGTAAAGGAACGTCTTAATGGGAATTTTGTCAGTGACTCTAGTCGGCAGCGGCAAATCACTGGAAAGAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTTTTTGAGGATGATGAACCCCGAGTTTCTAATCGCCAAGTTACTGCTCAAGATCTTCGTTTGAAGCTTCAGAGAAGGGGTCTTCAACCTGCAGCTCAGAGTGGAAAGAATTCTGTTCCAGGTATGCGTGATCTACGTGAAAAGTTATCAGGGACAATGACTCCACAGCCTAAAAACTCTGATCCACCAAAGTCAAAAGTGGAAGTTGTTAAGCCAAGCAGTAAAAGTGTCATTGCTGAGGCACCTGTACCACAGATTAAAAGAGGAGTTCATCCAGCTCCCAAAAAGAAGGCTTCACAAAAGGCTGATACTTCAGTGGATGAATTTTTGCACTCCCTGGGTCTTGAGAAGTATCTTATAACTTTCCAAGCTGAAGAAGTTGATATGACAGCTCTCATGCACATGACTGATGAGGATCTCAAGGTTATGGGTATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAGTCAAAAGGTTGA | 624 | 0.4423 | MYSDRVESGARRSVKERLNGNFVSDSSRQRQITGKRQRQDDKWEHDLFEDDEPRVSNRQVTAQDLRLKLQRRGLQPAAQSGKNSVPGMRDLREKLSGTMTPQPKNSDPPKSKVEVVKPSSKSVIAEAPVPQIKRGVHPAPKKKASQKADTSVDEFLHSLGLEKYLITFQAEEVDMTALMHMTDEDLKVMGIPMGPRKKILLALESKG | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere11g0500 | 207 | MobiDBLite | consensus disorder prediction | 31 | 57 | - | - | |
| Dere11g0500 | 207 | FunFam | Sterile alpha motif domain-containing protein | 149 | 207 | - | - | |
| Dere11g0500 | 207 | SUPERFAMILY | SAM/Pointed domain | 149 | 204 | IPR013761 | - | |
| Dere11g0500 | 207 | ProSiteProfiles | SAM domain profile. | 147 | 201 | IPR001660 | GO:0005515 | |
| Dere11g0500 | 207 | PANTHER | SCP160 | 79 | 203 | - | - | |
| Dere11g0500 | 207 | CDD | SAM_superfamily | 151 | 204 | - | - | |
| Dere11g0500 | 207 | Gene3D | - | 149 | 207 | IPR013761 | - | |
| Dere11g0500 | 207 | MobiDBLite | consensus disorder prediction | 1 | 121 | - | - | |
| Dere11g0500 | 207 | Pfam | SAM domain (Sterile alpha motif) | 146 | 204 | IPR001660 | GO:0005515 | |
| Dere11g0500 | 207 | SMART | SAM_4 | 144 | 207 | IPR001660 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere11g0500 | Dere-ChrDere11 | 8409499 | 8415927 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere11g0500 | 37 | 206 | Glycosyltransferase | AT3G07170 | 63.529 | 8.09e-69 | 206 |