LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g0438	ATGGCGGACTTGCCACGAATTCGCCGGACCTCTTCTTCCGGTTCCTCCAGTTCGAGCGATATCTCCGTCAGAGTCGAGCGTGAAGTAGGTGTTGGAAGCGGAAGAACTAGTAAAGAAATGGATGGTGTTAAAGGTGTTCGCAATGGAGGTCCCCTTGATAATGGTGACATTAGCTCTCCAGGTGTTTCTGGCAGGGGTTTGTCTAAAGTGAACACTTTGCCAGCAGAAATATCACATGCAGACAAGTTGGTGTCATGTTCAGGTCAATTTAAGTTGGAAAGATCAAAAACTGAGAGGCAGAGACATCTGCGGCCTGAAGATGCAGTTCAGATTTTTGATGACAAAATTCCTTTTAAGGAGAAGCTTAAGTTGTTGAACAGGATAGCTACTGTAAAAGATGATGGAACTGTAGAATTTGAAGTTCCAGGAGATATAGAACCTGAAGCCCTCGGTGCTCGATCACATGTACATCACATTGTTGATGATGATCAACATGATGCAACAGACCTTCAAGACATACCGCCATTACAGATAGTAATGCTTATTGTTGGGACACGTGGAGATGTACAACCTTTTGTTGCAATAGGAAAACGGTTGCAGGAATATGGCCATCGTGTAAGATTAGCCACTCATTCAAATTTCAAGGAATTTGTCTTGACAGCTGGGTTGGAGTTTTATCCTTTAGGCGGCGATCCAAAAGTCCTTGCTGGTTATATGGTAAAAAATAAGGGCTTCCTGCCATCAGGACCTTCTGAGATACATATTCAACGAAATCAAATTAAAGAAATCATCAACTCTCTGCTTCCAGCTTGTAGAGAACCTGATATTGATTCTGGAGTTCCCTTCAAAGCTGATGCAATCATTGCCAATCCCCCAGCATATGGGCATACCCATGTGGCAGAGGCACTGAAAATACCAATACATATCTTTTTCACAATGCCATGGACGCCTACTAGTGAATTTCCACATCCTCTGTCCCGTGTAAAGCAACCAGCTGGTTATAGGCTTTCATACCAAATTGTTGACTCATTGATTTGGCTGGGAATACGAGACATGATTAATGATCTTAGGAAAAAAAAGCTAAAGCTTCGACCAGTCTCATATTTAAGTGGTTCACATGGTTCTAATACTGATGTGCCACATGCATATATGTGGAGTCCTCACCTTGTTCCTAAACCAAAAGATTGGGGACCAAAAATTGATGTTGTTGGGTTTTGCTTCCTTGATCTTGCATCAAACTATGAACCTCCTGAGTCCCTCGTAAAATGGCTTGAAGAGGGTGACAAGCCCATCTACATTGGATTTGGTAGCCTGCCTGTCCAAGAACCAGAAAAAATGACTCAAATAATTGTAGAAGCACTGGAAAAAACAGGACAGAGGGGAATCATCAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCCATTTACTTATTGGATAATTGCCCTCATGACTGGCTATTCTTACGCTGCAAGGCTGTGGTACATCATGGAGGTGCAGGAACGACAGCTGCTGGGCTAAAAGCTGCATGCCCAACAACCATAGTTCCATTCTTTGGTGATCAACCATTTTGGGGTGAGCGAGTACATGCCAAAGGTGTTGGTCCAGCGCCCATCCCAGTCGATGAGTTCTCTCTTTCCAAGTTGGTTGACGCAATAAATTTTATGCTAGATTCCAAGGTAAAAGATCGTGCAGTTGAACTTGCTAAGGCCATGGAAAATGAGGATGGGGTGGAAGGAGCTGTGAAAGCATTCTTTAAGCATCTACCTCGAAAGAAACCAGAGTCTGATTCAGAACCAGTGCCATCAAGTTCATTCTCTATAAGTAGCTGTTTTGGTTGTTCCGTGTTTTGA	1866	0.4325	MADLPRIRRTSSSGSSSSSDISVRVEREVGVGSGRTSKEMDGVKGVRNGGPLDNGDISSPGVSGRGLSKVNTLPAEISHADKLVSCSGQFKLERSKTERQRHLRPEDAVQIFDDKIPFKEKLKLLNRIATVKDDGTVEFEVPGDIEPEALGARSHVHHIVDDDQHDATDLQDIPPLQIVMLIVGTRGDVQPFVAIGKRLQEYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHIQRNQIKEIINSLLPACREPDIDSGVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVSYLSGSHGSNTDVPHAYMWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEEGDKPIYIGFGSLPVQEPEKMTQIIVEALEKTGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHAKGVGPAPIPVDEFSLSKLVDAINFMLDSKVKDRAVELAKAMENEDGVEGAVKAFFKHLPRKKPESDSEPVPSSSFSISSCFGCSVF	621

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g0438	621	PANTHER	STEROL 3-BETA-GLUCOSYLTRANSFERASE	76	601	-	-
	Dere11g0438	621	Pfam	UDP-glucoronosyl and UDP-glucosyl transferase	431	573	IPR002213	GO:0008194
	Dere11g0438	621	Gene3D	Glycogen Phosphorylase B;	407	576	-	-
	Dere11g0438	621	FunFam	Sterol 3-beta-glucosyltransferase UGT80A2	409	576	-	-
	Dere11g0438	621	CDD	GT1_Gtf-like	178	592	IPR002213	GO:0008194
	Dere11g0438	621	MobiDBLite	consensus disorder prediction	1	65	-	-
	Dere11g0438	621	Pfam	Glycosyltransferase family 28 N-terminal domain	178	322	IPR004276	GO:0005975\|GO:0016758\|GO:0030259
	Dere11g0438	621	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	178	592	-	-
	Dere11g0438	621	Gene3D	Glycogen Phosphorylase B;	178	581	-	-
	Dere11g0438	621	FunFam	Sterol 3-beta-glucosyltransferase UGT80A2	178	408	-	-
	Dere11g0438	621	MobiDBLite	consensus disorder prediction	8	23	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g0438	Dere-ChrDere11	7263212	7289723	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere11g0438	87	619	Glycosyltransferase	AT3G07020	79.777	0.0	880