Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0435 ATGGCGGTCACGAAGCTTTTCTCGCTCTACATTTTCATGTCCTTCTTCTTTTTCTTCTTGACTGAATCTTTGCCTTCTTCTTCTTCGGATGTCGAGCTTCTCTTGGGTAAAATCAAAGCTTCTCTTCAAGGTAACGCTGAGAACCTCGTTTTGTCTTCATGGAATTCATCTACGCCACTTTGCCAATGGAGAGGACTGAAATGGGTTTTCTCAGACGGCTCTCCTCTTTCGTGCAATGATTTGTCTTCACCACAGTGGACCAATCTTTCGCTGTTCAGAGACCCCTCTTTACATTTACTCTCTCTTCAGCTTCCTTCTGCGAATCTCTCTGGTTCGCTCCCCAGGGAGATTGCAGAATTTCCCATGTTTCAGAGTCTCTATCTCAACATCAATTCGTTGAAAGGGACAATCCCCCTCGAGCTTGGGTATAGTTCCTCGCTGTCTGACGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTACCCCCCTCGATCTGGAATTTGTGTGATAGGCTTGTCTCCCTTAGACTCCATGGTAATTTGCTTTCTGGGTCTCTTCCCGAACCGGCGTTGCCGAACTCTACTTGCCAGAATCTGCAATTTCTTGATTTGGGTAACAACAAGTTTTCCGGTTTTTTTCCTGAATTCATTACACATTTTGATGGGCTGAAACAGCTTGACTTGGGGAATAATATGTTTATGGGTTCAATTCCTCAGAGCTTATCTGGACTAAAAAGACTTGAGAAATTGAACCTTTCTCACAACAATTTCAGTGGGGCTTTGCCTATTTTGGGTGATTCATCCAAATTTGGTGTGGAGGTTTTTGAAGGGAATAACCCTGGCTTGTGTGGGCCACCGTTGGCAAGTTGTAGCGGAACTTCTAGATTGAGCTCTGGTGCAGTTGCTGGTATAGTTATCACTCTAATGACTGGAGCTGTGGTTTTAGCTTCTTTGCTTATTGGGTATATGCAAAACAAGAGGAGGAAGGGTAGGGGAGAAAGCGAAGATGAATTGGAGGAAGATGAAGATGATGATGAAGAAACTGGTGGTAATGCTACTATTGGCGGTGGTGGTGGTGAAGGGAAGCTTATGTTGTTCCAAGGCGGCGAGAATTTGTCATTAGATGATGTGTTGAATGCGACAGGGCAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTTGCTGATGGAAGGACCATTGCTTTGAGGTTATTGAGAGAAGGTAGCTGCAAGGATAGGGCTTCATGCTTGCCCGTGATTAAGCAATTGGGAAGAATTCGACATGAGAATTTGATTCCCTTGAGAGCCTTCTATCAGGGGAAGAGAGGAGAGAAGCTTCTCATATATGATTATCTCCCTCTAAGAAGTCTGCATGATCTATTACATGAAACTAAAGCAGGAAATCCAGTGCTGAACTGGGCTAGGCGTCACAAGATTGCCTTAGGTATAGCCAGGGGGCTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGGAATGTTCGATCCAAGAATGTGCTAGTGGATGATTTTTTCGTTGCCAGGCTCTCCGAGTTTGGGCTTGACAAGCTTATGATTCCTGCTGTAGCTGATGAAATGGTGGCACTCGCTAAAACAGATGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGTAACTCCAGGACTGATGTTTTTGCATTTGGCATATTACTGTTGGAGATTTTGATTGGGAAGAAACCCAGAAAGGATGGGAGGAGTGGCGAGTTTGTGGATTTGCCTTCAATGGTGAAAGTAGCAGTTTTGGAGGAGACAACCATGGAAGTGTTTGACGTGGAGCTTCTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAAGCATTGAAGCTAGCAATGGGTTGTTGTGCCCCTGTAGCTTCAGTGAGACCAAGCATGGAGGAAGTTGTGAGACAGTTGGAGGAGAATAGGCCAAGGAATAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGGAGTGGTACTCCCTTTTAA 2040 0.4461 MAVTKLFSLYIFMSFFFFFLTESLPSSSSDVELLLGKIKASLQGNAENLVLSSWNSSTPLCQWRGLKWVFSDGSPLSCNDLSSPQWTNLSLFRDPSLHLLSLQLPSANLSGSLPREIAEFPMFQSLYLNINSLKGTIPLELGYSSSLSDVVLDDNMLSGALPPSIWNLCDRLVSLRLHGNLLSGSLPEPALPNSTCQNLQFLDLGNNKFSGFFPEFITHFDGLKQLDLGNNMFMGSIPQSLSGLKRLEKLNLSHNNFSGALPILGDSSKFGVEVFEGNNPGLCGPPLASCSGTSRLSSGAVAGIVITLMTGAVVLASLLIGYMQNKRRKGRGESEDELEEDEDDDEETGGNATIGGGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGRTIALRLLREGSCKDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRSLHDLLHETKAGNPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDDFFVARLSEFGLDKLMIPAVADEMVALAKTDGYKAPELQKMKKCNSRTDVFAFGILLLEILIGKKPRKDGRSGEFVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0435 679 MobiDBLite consensus disorder prediction 329 359 - -
Dere11g0435 679 SUPERFAMILY Protein kinase-like (PK-like) 388 655 IPR011009 -
Dere11g0435 679 SUPERFAMILY L domain-like 77 288 - -
Dere11g0435 679 ProSiteProfiles Protein kinase domain profile. 379 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0435 679 MobiDBLite consensus disorder prediction 660 679 - -
Dere11g0435 679 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Dere11g0435 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 658 IPR046959 -
Dere11g0435 679 FunFam Leucine-rich repeat receptor-like protein kinase 196 290 - -
Dere11g0435 679 Gene3D Ribonuclease Inhibitor 194 294 IPR032675 -
Dere11g0435 679 Gene3D Transferase(Phosphotransferase) domain 1 457 671 - -
Dere11g0435 679 MobiDBLite consensus disorder prediction 655 679 - -
Dere11g0435 679 Pfam Protein tyrosine and serine/threonine kinase 383 654 IPR001245 GO:0004672|GO:0006468
Dere11g0435 679 Pfam Leucine rich repeat N-terminal domain 32 65 IPR013210 -
Dere11g0435 679 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Dere11g0435 679 Gene3D Phosphorylase Kinase; domain 1 363 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0435 Dere-ChrDere11 7221415 7224319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0435 12 679 Receptor kinase-like Gene Family AT3G24660 74.519 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere11g0435 PK_Tyr_Ser-Thr 1.3e-25 CL0016