Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0431 ATGTATCATCTTCAGAGGCTAAGAAGTAGTTGTGTTTCGAGGAGATTTTTCTCAAATTTTTACTGGAAAAAGCAGGTAACTACCTCATCGCATTCACCTGCAGATTTTACCAAAATGTCGAGCACTGCGGGTCTGGTGATTCCTTGCAAAGCTGCGGTTGCATGGGAAGCAGGAAAACCATTGGTGATAGAACGTGTGGAGGTAGCTCCTCCACAGGCCATGGAAGTGAGGATGAAGGTCAAATATACCTCTCTTTGCCATACAGATCTCTACTTCTGGGAGGCCAAGGAACAAACTCCTCTGTTCCCTAGAATCTTTGGGCATGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTGTCAGACTTGGAGGTTGGGGATCATGTGCTTCCAGTGTTCACTGGGGAATGTGGGGAATGTGCACATTGCAAGTCTGAGGAGAGCAACATGTGTGACCTTCTGAGAATAGACACAAGTAGAGGAGTGATGCTTAGTGATGGAAGAAGCAGGTTCTCCATTAATGGGAACCCAATAAACCACTTTGTTGGAACTTCCACTTTCAGTGAATACACTGTGGTTCACTCTGGCTGCCTTGCAAAGATCAACCCACAAGCTCCTATGGATAAAGTCTGTGTCCTCAGCTGCGGCATCTCAACTGGATTAGGAGCAACTCTGAATGTAGCAAAACCAAAGAAAGGTTCCTCTGTTGCAATCTTTGGTCTTGGAGCTGTTGGCCTTGCGGCTGCTGAGGGTGCAAGAATTGCTGGGGCATCTAGGATCATTGGGATTGACTTGAACCCAAACAGGTTTGAGCAAGCCAAGAAATTTGGAGTAACAGAGTTTGTAAATCCAAAGGACCATGATAAACCAGTTCATCAGGTAATTGCAGATATGACAAATGGTGGAGTGGACCGAAGTGTGGAGTGCACTGGAAACGTCAATGCCATGATCTCTGCTTTTGAATGTGTTCATGATGGGTGGGGTGTTGCTGTGCTTGTTGGAGTACCCAATAAGGATGCAGTTTTCATGACCAAACCCATCAATATGCTGAATGAAAGAACACTTAAAGGCACTTTCTTTGGAAACTACAAGCCCAGGACTGATCTTCCATCTGTAGTTGACATGTACTTGAACAAGAAATTGGAATTGGACAAGTTCATAACACATAGAGTGTCCTTCTCTGAGATAAACAAGGCCTTTGAGTTGATGTTGAAGGGTGAGGGATTACGCTGTATCATTAGCATGGAAGATTAG 1257 0.4503 MYHLQRLRSSCVSRRFFSNFYWKKQVTTSSHSPADFTKMSSTAGLVIPCKAAVAWEAGKPLVIERVEVAPPQAMEVRMKVKYTSLCHTDLYFWEAKEQTPLFPRIFGHEAAGIVESVGEGVSDLEVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTSRGVMLSDGRSRFSINGNPINHFVGTSTFSEYTVVHSGCLAKINPQAPMDKVCVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEQAKKFGVTEFVNPKDHDKPVHQVIADMTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINMLNERTLKGTFFGNYKPRTDLPSVVDMYLNKKLELDKFITHRVSFSEINKAFELMLKGEGLRCIISMED 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0431 418 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 380 IPR036291 -
Dere11g0431 418 Gene3D - 57 408 - -
Dere11g0431 418 Pfam Alcohol dehydrogenase GroES-like domain 75 201 IPR013154 -
Dere11g0431 418 FunFam Alcohol dehydrogenase class-P 221 359 - -
Dere11g0431 418 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 107 121 IPR002328 GO:0008270|GO:0016491
Dere11g0431 418 PANTHER ALCOHOL DEHYDROGENASE 46 414 - -
Dere11g0431 418 FunFam alcohol dehydrogenase 1-like isoform X1 57 220 - -
Dere11g0431 418 Gene3D - 221 359 - -
Dere11g0431 418 Pfam Zinc-binding dehydrogenase 244 375 IPR013149 -
Dere11g0431 418 SUPERFAMILY GroES-like 366 414 IPR011032 -
Dere11g0431 418 SUPERFAMILY GroES-like 42 224 IPR011032 -
Dere11g0431 418 CDD alcohol_DH_plants 47 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0431 Dere-ChrDere11 7175192 7180181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0431 75 408 Monolignol Biosynthesis Gene Families AT1G72680 23.599 6.30e-12 64.7