LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g0429	ATGAATGGTGGAGAGGAACTGCAACTGCAAGTAGGAGACTTGCTTAAGGAAGAAGACGACACAGTTATGGCGGCGGTTAGTGAGAGAGAGATCTGGCTTCCGAATAATAACAATGGCCAAGATGAGCACACTGATCTTCTTGCTGGCGTAGTGGACGACGCTTCTCTGTTTTACGCCGACGATGACTTCCCTTCTCTCCCTGACTTCTCATGCATGTCATCTTCTTCGTCTTCATCTTCAACCCCAGCCACAGTCAAAACCATCACGTGCGTCTCCTCCTCTAATACGTCGCCTTCTGCAACTTCATGGGCGAATGCGAATCTGAAGTCTGATGCTGAGGATCATGCCCCTCCGCCGCTGCCACAGTCGTTATCCTCCACTTCTTCCATGGAGATTCCGCAGCCGCCGGATCAAGGAGGCGTTGACGGCGGAGATTATTGTATGGACATGATGGACACATTCGGGTACATGGAACTTATGGAGGGCAACGATTTCTTCGACCCTTCGTATATCTTTGAAAATGAAGAAAATCTATTAGAGGAATTCGCACGATTAGAGCAGAGCCCACTGGAATCGGAAGACAAGGGACATGCAAAAGGAATGGAAGTACTGCAACAGCAGCAGCAGCATCAACAGCAAGAATCGCCGCCATTAATGGAGAGACAGGCCATGGATGAAGAAATGAGCGCGGTGTTCTTGGAGTGGCTCAAGACGAACAAGGATAGCGTGTCGGCGAGTGACTTGAGGAACGTGAGGCTCAAGAAATCCACCATAGAATGTGCAGCCAAGCGTCTGGGAGGAGGAAAAGAAGCCATGAAGCAATTGTTGAAGCTCATTCTTGAATGGGTTCAGACCAGTCATCTTCAGAATAAGAGGCGCAAGGAAAATCATACTGATAGTTACAATAATAATGATAATAGTAATAATCTTCTCATGACCCAATTTCAGGATGCCACAAATCCTAGCTCTAATTTGAACCACCAAACTTCATTTGGACCCGATTGGATCTCTACAACGGCCTACGGGGCAGATCCGTCGGCTCTGGCGGCGGCCCCGGCACCGTGGTTTGGGTATAACGTGGCTGCAGACCCGTTTTCCAGTGGAGCTTGTAGTGAATTTCATATGCTGGAATCTACTCATTCATGGCCTCCATCTCAGTTCACTGTTTATAACAACCAGCCATTTGGGAACAATAATCTACAACCGGGGGCGACGGCGGCGTTTGGTGGTTATGGGAGTCAGTACTCGTATCAGTTTTTTCACGGCTCCGGCACTGATAGAGGGGTGAGATTAGGTCCGTTGGCGACGAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGACGGTGTTTATCTCATCACAGGCATCACAATCACCATGAACAACAGATCCAGCACAATCAAACTGGTGATTATTGCACTGCTGCTACAGTAGCAGCGCATGCAAATCTAGATAACTGGTTGTATTGGCAGCCCGTGGTGGCGGCCGGCGGTGGGGCCGCTTCTGTTGCTCCATTGGTTCCGGCGGAGCCGCCTTTGGGGCGACGGGTGGAGGATCGGACGGCCATGCAAACCCGCCAGAGTTATCAACAACAGAACCGGGTCTCATCAGATAGGCGACAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAGCAAAGCGATGTGGGTAATTTGGGGAGGATTGTTTTGCCAAAGAAAGAGGCAGAAACCCATTTGCCAGAACTGGAGGAACGAGATGGAATTTCTATAGCAATGGAAGACATTGGAACTTCACGCGTCTGGAATATGCGATATAGGAGACTTTGTGAGAGCCAATGGGCTCCAAGAAGGAGACTTCATAGTGATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGGGGTGTAAAGGTAAGGCAAGCAGGGGTGAAACCGGAGACGAAGAAAGCAGGAAAATCCCAGAAGGCTAA	1962	0.4934	MNGGEELQLQVGDLLKEEDDTVMAAVSEREIWLPNNNNGQDEHTDLLAGVVDDASLFYADDDFPSLPDFSCMSSSSSSSSTPATVKTITCVSSSNTSPSATSWANANLKSDAEDHAPPPLPQSLSSTSSMEIPQPPDQGGVDGGDYCMDMMDTFGYMELMEGNDFFDPSYIFENEENLLEEFARLEQSPLESEDKGHAKGMEVLQQQQQHQQQESPPLMERQAMDEEMSAVFLEWLKTNKDSVSASDLRNVRLKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENHTDSYNNNDNSNNLLMTQFQDATNPSSNLNHQTSFGPDWISTTAYGADPSALAAAPAPWFGYNVAADPFSSGACSEFHMLESTHSWPPSQFTVYNNQPFGNNNLQPGATAAFGGYGSQYSYQFFHGSGTDRGVRLGPLATKEARKKRMARQRRCLSHHRHHNHHEQQIQHNQTGDYCTAATVAAHANLDNWLYWQPVVAAGGGAASVAPLVPAEPPLGRRVEDRTAMQTRQSYQQQNRVSSDRRQPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTSRVWNMRYRRLCESQWAPRRRLHSDILRCEVWQIYDKGCKGKASRGETGDEESRKIPEG	653

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g0429	653	MobiDBLite	consensus disorder prediction	120	134	-	-
	Dere11g0429	653	MobiDBLite	consensus disorder prediction	522	542	-	-
	Dere11g0429	653	MobiDBLite	consensus disorder prediction	110	144	-	-
	Dere11g0429	653	MobiDBLite	consensus disorder prediction	634	653	-	-
	Dere11g0429	653	Gene3D	-	540	618	IPR015300	-
	Dere11g0429	653	MobiDBLite	consensus disorder prediction	289	309	-	-
	Dere11g0429	653	SUPERFAMILY	DNA-binding pseudobarrel domain	549	604	IPR015300	-
	Dere11g0429	653	PANTHER	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	205	608	IPR044800	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g0429	Dere-ChrDere11	7153168	7155781	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere11g0429	6	603	B3 DNA Binding Superfamily	AT3G24650	42.284	1.57e-106	337