Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0413 ATGTCAAGAACAGGTTCATCAAGATGGAGCCCAACCCCAGAGCAACTGATGATATTGGAGGAACTCTACAGGAGTGGGATTAGAACTCCTACTGCTTCCCAAATCCAACACATAACGACCCACCTCTGTTTCTACGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAACCACAAGGCTAGGGATAGGCAGAAGCTCAGGAGGAAACTTAGCAAGCAACTCCACCTACAGCAACTACAACATCAACAACAACAAATGCAAGTCCATCATTGCCAACTGATTAATCAGAATAAAAGTCATCACTGTTTCTTTGGTGGCTTTGATTCTTCTCATGGTTCTGCTACCCAAGAAGTTTCTTTTTATAACCCAGATATCTTACTTTCTCAGGGAGAAGCTGGAGACACATCAGAGACATGGAAAACTGTGCATAACCCACAAAGTGTGGTGGCTAATACAGAGGCATCATTGCTGTGCAACTATGGTTGGAGTACTGTGGATGTTAATGAAGCATCCTCATGTTGCACAACTCGACCTCTTAAGACTCTGGACCTCTTTCCAACCACATCTTCCAAACTCAGAGAAGACCACTGCACCACATCCACCTAG 612 0.4395 MSRTGSSRWSPTPEQLMILEELYRSGIRTPTASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLSKQLHLQQLQHQQQQMQVHHCQLINQNKSHHCFFGGFDSSHGSATQEVSFYNPDILLSQGEAGDTSETWKTVHNPQSVVANTEASLLCNYGWSTVDVNEASSCCTTRPLKTLDLFPTTSSKLREDHCTTST 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0413 203 Gene3D - 1 67 - -
Dere11g0413 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 200 IPR044555 GO:0003700|GO:0099402
Dere11g0413 203 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Dere11g0413 203 CDD homeodomain 8 67 IPR001356 GO:0003677
Dere11g0413 203 FunFam WUSCHEL-related homeobox 4 6 73 - -
Dere11g0413 203 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Dere11g0413 203 SMART HOX_1 4 71 IPR001356 GO:0003677
Dere11g0413 203 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0413 Dere-ChrDere11 6851117 6852408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0413 1 74 Wox Gene Family AT2G28610 82.432 6.62e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere11g0413 Homeodomain 8.6e-18 CL0123