Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0372 ATGTCTGTGACTGTGAAGCTTTTGGCTATGGTGCTTTTGACGGTGAGAACAATGGCCGTAGTAAGTACTGAAGATACAAGTTTCATCTTTAATAATGGGTTCCAATCAGCTAACTTAACCACGGATGGTCTGTCTTCCGTCACTTCCAATGGCATACTCCAACTCACCAATGAAACCAAGCGAGAATCTGGTCATGCATTCTACCCCTATCCATTTGTGTTCAAAAACTCTTCTTCTTTCTCTACCACTTTCGTTTTCGCCATTAGACCTCAATACCCAAATTTGAGTGGTCATGGAATGACTTTTGTAATCTCCCCAACAAAATCACTTCAAGGTGCTGCTTCCACCCAATACCTCGGCCTCTTCAACAAGACCAGCAATGGCAAGCCCACAAACCATGTTTTCGCCGTAGAACTCGACACCATCCAAAGCATGGACTTCGGAGATGTCAATGATAATCATGTCGGAATCGACATTAACGACTTGAAGTCAGCTAATTCTACTCCTGCAGGATATTATTCCAGAGGCGATCGGTTTCAGAATTTGAGCCTTATCAGTGGTCTTCCGATGCAACTGTGGGTGGACTATGATTCAGGCAAGAAGCAAATTAGTGTCACCCTAGCTCCAGTCAATGTTCACAAACCCGAAACTCCATTGGTGACGTTGTCCCAAGATCTTTCTCGGATTCTAAGCAATCCCATTTATGTGGGATTCTCGTCCTCCAGTGGGACAGTCTTTTCTTTCCATTATGTTATTGGTTGGAGCTTCAAACTCGACGGGGAGGCTGAAAGCCTCGTAATCTCTGAACTCCCGAAGCTACCACGACTAGGTGGAAAAAAACAATCAATGTTTCTGCCAATTGGGCTACCTCTGTTTGCACTCTGTTTTATTATTCTGGTGAGTTTATCTGTAGCTTATTACATATATAGGAAAAAGAAATTTTCTGAGATCCTGGAAGAGTGGGAGCAGGGCTATGGTCCTCACAGGTTCAAATACAAAGATCTCTACTTCGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTGGGTAGAGGTGGATTTGGCAGGGTGTACAAAGGGGCACTGCCAAGTTCAAAACTTGAGGTTGCTGTGAAAAGAGTGTCCCATGAATCCCAACAAGGTATGAGGGAATTCATAGCAGAAATCGTCAGTATCGGTCGTCTTCGCCACCGAAACCTCGTCCCTCTTCTGGGCTACTGTAGGCGAAAAGGAGAGCTTCTTTTGGTCTATGACTTCATGCCAAATGGAAGCTTAGATAAATACCTATATAACCAACCTAAGGTGACACTGAATTGGACACAAAGATTCAATATCATCAAAGGGGTAGCTTCGGGATTGTGCTATTTACACGAAGAATGGGAGCAAGTGGTGGTTCACAGAGACATAAAAGCGAGCAATATTCTTCTAGATTCAGAGTTAAATGGAAGATTAGGAGATTTCGGTCTTGCAAGATTATACGACCATGGGAGCGATCCTCAGACTACACATGTGGTCGGGACTCTCGGGTATCTGGCACCAGAGCAGACAAGAACAGGGAGAGCCACGACAAGATCCGATGTTTTTGCCTTTGGTGCTTTTCTACTTGAGGTTGCCTGCGGAAGAAGGCCTATAGAGCTAGGAAGTGAAGATGACAGCGTCATTTTGGTGGATTGGGTTTTCGGATTATGGAATAGGGGAGAGATCCTTGAGGCGAAGGATGAGAATTTAGGAACAGAGTACAGAGCAGAGGAGGCAGAGTTGGTGTTAAAACTTGGGCTTCTGTGTTCGAATTCTGAGGCTACGGGTAGGCCAAGCATGCGTCAAATTGTGCAGTACTTGAATTGGGATATGCCGTTGCCTGTACTGTCTTCACTGAGCTTATCTACTACCTCTTCTGGGTTTTCATTTGGGGATCATCAAAACTTTCACAACTCTGCAACGTTCTTTCCATCATCTTCCATGGATGGGTGCTACACTCAAAGTTCGATAGCAGAATCGCACCTCTCTGGAGGTCGTTGA 2016 0.4484 MSVTVKLLAMVLLTVRTMAVVSTEDTSFIFNNGFQSANLTTDGLSSVTSNGILQLTNETKRESGHAFYPYPFVFKNSSSFSTTFVFAIRPQYPNLSGHGMTFVISPTKSLQGAASTQYLGLFNKTSNGKPTNHVFAVELDTIQSMDFGDVNDNHVGIDINDLKSANSTPAGYYSRGDRFQNLSLISGLPMQLWVDYDSGKKQISVTLAPVNVHKPETPLVTLSQDLSRILSNPIYVGFSSSSGTVFSFHYVIGWSFKLDGEAESLVISELPKLPRLGGKKQSMFLPIGLPLFALCFIILVSLSVAYYIYRKKKFSEILEEWEQGYGPHRFKYKDLYFATKGFREKELLGRGGFGRVYKGALPSSKLEVAVKRVSHESQQGMREFIAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPKVTLNWTQRFNIIKGVASGLCYLHEEWEQVVVHRDIKASNILLDSELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEQTRTGRATTRSDVFAFGAFLLEVACGRRPIELGSEDDSVILVDWVFGLWNRGEILEAKDENLGTEYRAEEAELVLKLGLLCSNSEATGRPSMRQIVQYLNWDMPLPVLSSLSLSTTSSGFSFGDHQNFHNSATFFPSSSMDGCYTQSSIAESHLSGGR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0372 671 SUPERFAMILY Protein kinase-like (PK-like) 324 624 IPR011009 -
Dere11g0372 671 FunFam L-type lectin-domain containing receptor kinase S.4 419 624 - -
Dere11g0372 671 CDD STKc_IRAK 348 613 - -
Dere11g0372 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 277 IPR013320 -
Dere11g0372 671 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Dere11g0372 671 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0372 671 PANTHER - 34 616 - -
Dere11g0372 671 Gene3D - 24 269 - -
Dere11g0372 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 260 IPR001220 GO:0030246
Dere11g0372 671 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Dere11g0372 671 Pfam Legume lectin domain 26 270 IPR001220 GO:0030246
Dere11g0372 671 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Dere11g0372 671 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
Dere11g0372 671 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0372 671 FunFam L-type lectin-domain containing receptor kinase V.9 25 263 - -
Dere11g0372 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Dere11g0372 671 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0372 Dere-ChrDere11 6387384 6389399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0372 22 671 Receptor kinase-like Gene Family AT2G37710 62.861 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0372 Pkinase 1.4e-46 CL0016