Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0364 ATGGCTTTTGTAATCTCCCCAACAAAATCGCTTCCAGGTGCCGCTTCCACCCAATACCTCGGCCTCTTCAACGACGCCAGCAATGGCAAGCCCACAAACCATGTTTTCGCCGTAGAACTCGACACCATCCAGAGCATGGAATTCGGAGATACTAATGATAATCATGTCGGAATCGACATTAACGACTTGAAGTCAGCTAATTCTACTCCTGCAGGATATTATTCCAGAGGTGATCGGTTTCAGAATTTGAGCCTTATCAGTGGCCTTCCGATGCAACTGCGGGTGGACTATGATGCAGGCAAGAATGGGACAGTCTTTTCTTTCCATTATGTTATTGGTTGGAGCTTCAAGCTCAATGGGGAGGCTGAAAGCCTCGTAATCTCTGAACTCCCGAAGCTACCACGACTAGGTGGAAAAAACCAATCAATGTTTCTGCCAATTGGGTTACCTCTGTTTGCGCTCTTTTTTATTGTTCTGGTGATTCTATCTGTAGTTTACTACATAAAAAGGAAAAGGAGATTTTCTGAGATTCTGGAAGAGCGGGAGCAAGACTATGGTCCTCACAGGTTCAAATACAAAGATCTCTCCTTCGCCACAAAGGGATTCAGAGAGAGAGAGCTTCTGGGTAGAGGTGGATTTGGCAAGGTGTACGAAGGGACAATGCCAAATTCGAAACTTGAGGTTGCTGTGAAAAGAGTGTCCCATGAATCCCAACAAGGTATGAGGGAATTCGTAGCAGAAATCATTAGTATTGGTCCTCTTCGCCACCGAAACCTTGTCCCTCTTCTGGGCTACTGCAGGCGAAAGGGAGAGCTTCTCTTAGTCTACGACTTCATGCCAAATGGAAGCTTTGATAAATACCTCTATAACCACCACAGAGTTGCATGCGGAAGAAGGCCTCTAGAGCAAGGAAGTGAAGATGGCAGTGTCATTTTGGTGGATTGGGTTTTCGGATTATGGAATAGGGAAGAGATCATTGAGGCGAAGGATCAGAATTTAGGAACAGAGTATAGAGCAGAGGAGGTAGAGTTGGTGTTAAAACTTGGGCTTCTGTGTTCGAATTCAGAGGCTAAGGGTAGGCCAAGCATGCGTCAAGTTGTGCAGTACTTGAATGGGGATATGCCTTTGCCTGAATTGTCTTCACTAAGCTTATCTGGTACTTCTTCTGGGTTTTCATTCGGGGATCATCAAAAGTTTCTTAACTCTGCAATGTCCTTTCCGTTATCTATGAATGGATGCTTTTCGCACGGTTCGGTAGCTGAATCGCTCCTCTCTGGTGGTCGTTGA 1287 0.4553 MAFVISPTKSLPGAASTQYLGLFNDASNGKPTNHVFAVELDTIQSMEFGDTNDNHVGIDINDLKSANSTPAGYYSRGDRFQNLSLISGLPMQLRVDYDAGKNGTVFSFHYVIGWSFKLNGEAESLVISELPKLPRLGGKNQSMFLPIGLPLFALFFIVLVILSVVYYIKRKRRFSEILEEREQDYGPHRFKYKDLSFATKGFRERELLGRGGFGKVYEGTMPNSKLEVAVKRVSHESQQGMREFVAEIISIGPLRHRNLVPLLGYCRRKGELLLVYDFMPNGSFDKYLYNHHRVACGRRPLEQGSEDGSVILVDWVFGLWNREEIIEAKDQNLGTEYRAEEVELVLKLGLLCSNSEAKGRPSMRQVVQYLNGDMPLPELSSLSLSGTSSGFSFGDHQKFLNSAMSFPLSMNGCFSHGSVAESLLSGGR 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0364 428 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 268 IPR013320 -
Dere11g0364 428 Pfam Legume lectin domain 1 101 IPR001220 GO:0030246
Dere11g0364 428 CDD lectin_legume_LecRK_Arcelin_ConA 1 120 IPR001220 GO:0030246
Dere11g0364 428 Gene3D Transferase(Phosphotransferase) domain 1 281 385 - -
Dere11g0364 428 ProSiteProfiles Protein kinase domain profile. 202 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0364 428 Gene3D Phosphorylase Kinase; domain 1 187 278 - -
Dere11g0364 428 Gene3D - 1 111 - -
Dere11g0364 428 FunFam Lectin-domain containing receptor kinase A4.3 187 278 - -
Dere11g0364 428 SUPERFAMILY Protein kinase-like (PK-like) 187 371 IPR011009 -
Dere11g0364 428 Pfam Protein tyrosine and serine/threonine kinase 205 291 IPR001245 GO:0004672|GO:0006468
Dere11g0364 428 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524
Dere11g0364 428 SMART serkin_6 202 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0364 428 PANTHER - 294 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0364 Dere-ChrDere11 6188579 6190293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0364 258 428 Receptor kinase-like Gene Family AT2G37710 49.718 6.47e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0364 PK_Tyr_Ser-Thr 3.1e-16 CL0016