Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0357 ATGACGTTTGTGAAGCTTTTGCCCATGGTGCTTTTGGTGGTCACAACAATAGCCGTAGTGAGTACTGAAGATACAAGTTTCATCTTTAATAATGGGTTCCAATCAGCTAACTTAACCACGGACGGTCTGTCTTCCGTCACTTCCAATGGCATACTCCAACTCACCAATGAAACCAAGCTAGAATCAGGTCATGCATTCTACCCCTATCCATTTGTGTTCAAAAACTCTTCTTCTTTCTCTACCACTTTCGTTTTCGCCATTAGACCTCATTATCCAACTTTAAGTGGTCATGGAATGGCTTTTGTAATCTCCCCAACAAAATCGCTTCAAGGTGCTGCTTCCACCCAATACCTCGGCCTCTTCAACGAGACCAGCAATGGCAAGCCCACAAACCATGTTTTCGCCGTAGAACTCGACACCGTCCAGAGCATGGACTTTGGAGATATCAATGATAATCATGTCGGAATCGACATTAACGACTTGAAGTCAGCTAATTCTACTCCTGCAGGATATTATTTCAGAGGTGATCGGTTTCAGAATTTGAGCCTTATCAGCGGCCTTCAAATGCAACTGTGGGTGGATTATGATGCAGGCAAGAAGCAAATTAATGTCACACTAGCTCCAGTTGACCTTAACAAACCCGAAACTCCATTGGTAACGTTGTCCCAAGATCTTTCTCGGATTCTAAGCAATCCCATTTATGTTGGATTCTCATGTTCCACTGGGTCACTCGTTGCTTTACACTATGTTCTTGGTTGGAGCTTCAAGCTCAATGGGGAGGCTCAAAACCTCGTAATCTCTGAACTCCCAAAGCTACCTCGACTAAGTGAAAAAGAACAATCAATGTTTCTGCCAATTGGGTTACCTCTGTTTGCGCTCTGTTTTATTGTTCTGGTGAGTCTATCTGTAGTTTACTACATAAAAAGGAAAAGGAGATTTTCTGAGATTCTGGAAGAGTGGGAGCAAGACTATGGTCCTTACAGGTTCAAATACAAAGATCTCTACTTCGCCACAAAGGGATTCAGAGAGACAGAGCTTCTGGGTAGAGGTGGATTTGGCAAGGTGTACAAAGGGACAATGCCAAATTCGAAACTTGAGGTTGCTGTGAAAAGATTGTCCCATGAATCCCAACAAGGTATGAGGGAATTCGTAGCAGAAATCATTAGCATTGGTCGTCTTCGCCACCGAAACCTTGTCCCTCTTCTGGGCTACTGCAGGCGAAAAGGAGAGCTTCTCTTAGTCTACGACTTCATGCCAAATGGAAGCTTTGATAAATACCTCTATAACCACCCCAGAGTGACACTGAATTGGACACAAAGATTCAATATCATCAAAGGGGTAGCTTCGGGATTGTGCTATCTACACGAAGAATGGGAGCAAGTGGTGGTTCACAGAGACATAAAAGCGAGCAATATTCTTCTAGATTCAGAGTTAAATGGAAGATTAGGAGATTTCGGTCTTGCAAGATTATACGACCATGGGAGCGATCCTCAGACTACGCATGTGGTCGGGACTCTTGGGTATCTGGCTCCAGAGCAGATAAGAACAGGGAGAGCCACGACAAGATCCGATGTTTTTGCCTTTGGTGCTTTTCTACTTGAGGTTGCCTGCGGAAGAAGGCCTATAGAGCAAGGAAGTGAAGATGGCAGTGTCATTTTGGTGGATTGGGTTTTCGGATTATGGAATAGGGGAGAGATCATCGAGGCGAAGGATGAGAATTTAGGAACAGAGTATAGAGTAGAGGAGGTAGAGTTGGTGTTGAAACTTGGGCTTCTGTGTTCGAATTCTGAGGCTTCGGGTAGGCCAAGCATGCGTCAAATTGTGCAGTACTTGAATTGGGATATGCCGTTGCCTGTACTGTCTTCACTGAGCTTATCTCCTACTTCTGCGTTTTCATTTGGGGATCATCAAAAGTTTCACGACTCTGCAACGTTCGTTCCATCATCTTCCATGGACGGGTGCTTCACTCAAAGTTCGATAGCTGAATCGCACCTCTCTGGAGGTCGTTGA 2010 0.4458 MTFVKLLPMVLLVVTTIAVVSTEDTSFIFNNGFQSANLTTDGLSSVTSNGILQLTNETKLESGHAFYPYPFVFKNSSSFSTTFVFAIRPHYPTLSGHGMAFVISPTKSLQGAASTQYLGLFNETSNGKPTNHVFAVELDTVQSMDFGDINDNHVGIDINDLKSANSTPAGYYFRGDRFQNLSLISGLQMQLWVDYDAGKKQINVTLAPVDLNKPETPLVTLSQDLSRILSNPIYVGFSCSTGSLVALHYVLGWSFKLNGEAQNLVISELPKLPRLSEKEQSMFLPIGLPLFALCFIVLVSLSVVYYIKRKRRFSEILEEWEQDYGPYRFKYKDLYFATKGFRETELLGRGGFGKVYKGTMPNSKLEVAVKRLSHESQQGMREFVAEIISIGRLRHRNLVPLLGYCRRKGELLLVYDFMPNGSFDKYLYNHPRVTLNWTQRFNIIKGVASGLCYLHEEWEQVVVHRDIKASNILLDSELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEQIRTGRATTRSDVFAFGAFLLEVACGRRPIEQGSEDGSVILVDWVFGLWNRGEIIEAKDENLGTEYRVEEVELVLKLGLLCSNSEASGRPSMRQIVQYLNWDMPLPVLSSLSLSPTSAFSFGDHQKFHDSATFVPSSSMDGCFTQSSIAESHLSGGR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0357 669 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0357 669 Gene3D Phosphorylase Kinase; domain 1 327 417 - -
Dere11g0357 669 PANTHER - 33 615 - -
Dere11g0357 669 Gene3D - 23 269 - -
Dere11g0357 669 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Dere11g0357 669 FunFam Lectin-domain containing receptor kinase A4.3 326 417 - -
Dere11g0357 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 276 IPR013320 -
Dere11g0357 669 Gene3D Transferase(Phosphotransferase) domain 1 418 622 - -
Dere11g0357 669 SUPERFAMILY Protein kinase-like (PK-like) 322 641 IPR011009 -
Dere11g0357 669 ProSiteProfiles Protein kinase domain profile. 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0357 669 FunFam L-type lectin-domain containing receptor kinase V.9 24 262 - -
Dere11g0357 669 CDD STKc_IRAK 347 612 - -
Dere11g0357 669 Pfam Legume lectin domain 25 269 IPR001220 GO:0030246
Dere11g0357 669 FunFam L-type lectin-domain containing receptor kinase S.4 418 623 - -
Dere11g0357 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Dere11g0357 669 CDD lectin_legume_LecRK_Arcelin_ConA 25 259 IPR001220 GO:0030246
Dere11g0357 669 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0357 Dere-ChrDere11 6092616 6094625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0357 21 669 Receptor kinase-like Gene Family AT2G37710 62.043 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0357 Pkinase 3.2e-47 CL0016