Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0352 ATGGCCAACCTTCTTCTCAGACTCTTCTCTGCTTTGCTCTTCGTATTGGTCCCTGTGTCTTCTCAACTCGACGAGGTGTTCTTTTCCGGATTTAAGGGTGTCGGGACCAACTTAACCTTAGATGGAATAGCAGAAATCGAGAAAAATGGAATCTTGAAACTAACCAATGAGACAAGCAGATTAATCGGTCATGCTTTTTACTCATCTCCGTTTCAGTTCAAAAACTCCACTACTGGTAAAGCTTTCTCGTTTTCTACTTGCTTCGCTCTTGCTATAGTCCCCAGGCTCTCCGACATACAGGGCCATGGCATGGCTTTCGCAATAGCAAGTTCCAATCATCTCATAGCCTTACCCAGTCAGTATCTTGGCCTCCTTAATTCCACCGATATCGGAAATTTCTCAAACCATTTATTCGCCGTTGAGTTCGACACCGTCCAGGATTTCGAATTTCAGGACAAGAACGACAACCATGTAGGAATCGACATAAACAGCATGGTCTCCAACGCATCTGAGACCGCAGGGTATTACACCGACGATTCGGGTTCAACAAAGCAGACTCTCAATCTCACAAGTGGGAAACCGATTATGGCTTGGGTGGATTACGATTCGGGTTCAAATCTCTTGAGTGTTACTCTTTCTCCTACTTCGACGAAACCCAGAAAGCCACTCTTGTCATTTTCTGTAGATCTCTCGCCGATTCTTCGAGATTATATGTATGTTGGGTTCTCTGCTTCTACGGGTCTTCTTGCCAGCTCTCATCACGTCTTGGGTTGGAGCTTCAAAATGAATGGTCCATCACAACCCCTCGATCTCTCTTCTCTCCCACAACTTCCAGGTCCGAAGAAGAAGCCGACATCGCTCATCATAGGGGTTACAGTGCCGGTTATATTGATTTCGTTATCGGCGATCTTCGTCGGCGTATATCTGTTCAGGAAAATAAAAAACGCCGATATAATAGAAGCGTGGGAGCTAGAAATTGGACCCCATAGATATTCCTACCAAGAGCTCAAGAAAGCGACAAGAGGTTTCAAGGACAAGGAGCTTCTCGGACAAGGCGGGTTTGGTCGAGTGTACAAAGGGACACTCCCGCGTTCCAAAACCCAAGTCGCAGTTAAACGAGTCTCCCACGAATCCAAACAGGGCCTCCGGGAATTCGTGTCGGAAATCGCCAGCATTGGGCGGCTCCGTCACCGGAATCTCGTTCAGCTTCTGGGTTGGTGTCGCCGGCGAGGCGACCTCCTCCTCGTGTACGATTTCATGGCCAATGGGAGCTTAGACAAGTACCTGTTCGACGAGCCAGAAACTGTTCTTACCTGGGAACAGAGGTTCAAGATCATAAAAGGTGTGGCTTCGGCTCTTCTATATCTTCACGAAGGATACGAACAAGTCGTCATTCACCGAGACGTTAAAGCAAGCAATGTGTTACTAGACTCCGAGCTCAACGGAAGACTCGGAGATTTTGGCCTGGCTAGATTATACGAACATGGGGCTAACCCAAGCACGACCAGAGTGGTAGGTACGTTAGGCTATTTGGCTCCTGAATTGCCTCGAACTGGTCGAGCCACTACGGGCTCCGATGTGTTTGCTTTCGGTGCTCTTTTGCTTGAAGTGGCTAGTGGACGAAGACCCATTGAGCCTAAGGCTTTACCAGAAGAGCTGGTCTTAGTGGATTGGGTGTGGGAGAAGTACAGAGAAGGAAGGTTACTGGAAGTGGTGGATCCGAGGTTGAATGGGGAATTCGACAAGAAAGAGGTTATCATGGTGTTAAAATTGGGTTTGATTTGTTCGAATGATGTGCCTGATAATAGGCCTAGTATGAGGCAATTGTTGATGTTTCTGGAAGGAGAGGTGGAAGTACCCGAGGATTTGAGAAAACCAGGAGGTGGGAGTTATAACCATGAAGGCTTTGATGATTTCTTACTGCACTCGGTTGCTACTTCTAAGTTCGATAAGATGAGCACAAGCTCTTACACTGGCGGGCACATGGAGACTGATGGTACTCATTTTGCTTCTTTTAGTACCACCCCTCTTTCTCTTCTCGGTGGCAAAGGTGAAACAAGGTGA 2064 0.4738 MANLLLRLFSALLFVLVPVSSQLDEVFFSGFKGVGTNLTLDGIAEIEKNGILKLTNETSRLIGHAFYSSPFQFKNSTTGKAFSFSTCFALAIVPRLSDIQGHGMAFAIASSNHLIALPSQYLGLLNSTDIGNFSNHLFAVEFDTVQDFEFQDKNDNHVGIDINSMVSNASETAGYYTDDSGSTKQTLNLTSGKPIMAWVDYDSGSNLLSVTLSPTSTKPRKPLLSFSVDLSPILRDYMYVGFSASTGLLASSHHVLGWSFKMNGPSQPLDLSSLPQLPGPKKKPTSLIIGVTVPVILISLSAIFVGVYLFRKIKNADIIEAWELEIGPHRYSYQELKKATRGFKDKELLGQGGFGRVYKGTLPRSKTQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETVLTWEQRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDSELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTGSDVFAFGALLLEVASGRRPIEPKALPEELVLVDWVWEKYREGRLLEVVDPRLNGEFDKKEVIMVLKLGLICSNDVPDNRPSMRQLLMFLEGEVEVPEDLRKPGGGSYNHEGFDDFLLHSVATSKFDKMSTSSYTGGHMETDGTHFASFSTTPLSLLGGKGETR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0352 687 Pfam Legume lectin domain 28 274 IPR001220 GO:0030246
Dere11g0352 687 CDD lectin_legume_LecRK_Arcelin_ConA 28 264 IPR001220 GO:0030246
Dere11g0352 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Dere11g0352 687 PANTHER - 20 620 - -
Dere11g0352 687 FunFam L-type lectin-domain containing receptor kinase S.4 22 268 - -
Dere11g0352 687 Gene3D - 26 263 - -
Dere11g0352 687 FunFam L-type lectin-domain containing receptor kinase S.4 420 626 - -
Dere11g0352 687 Gene3D Transferase(Phosphotransferase) domain 1 420 627 - -
Dere11g0352 687 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Dere11g0352 687 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0352 687 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Dere11g0352 687 CDD STKc_IRAK 349 615 - -
Dere11g0352 687 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Dere11g0352 687 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Dere11g0352 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 282 IPR013320 -
Dere11g0352 687 FunFam Lectin-domain containing receptor kinase A4.3 328 419 - -
Dere11g0352 687 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0352 Dere-ChrDere11 6047522 6049585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0352 19 626 Receptor kinase-like Gene Family AT3G55550 63.312 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0352 PK_Tyr_Ser-Thr 1.3e-44 CL0016