Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0345 ATGGAAGTCACTTCTATAACGTATTTGTTGAAGAGCCTTTGTGATTATACGCATTGGAACTATGCTGTGTTTTGGAAGCTTAATTACTATCTTCCATTGACTTTGACCTGGGAAGATGGATACTATGGTTACCAGAAAGCAAATGAAGCCATGGAAAGTATGTGCAGTGACATTAATTTTGAAGCCTCAGATGAGGTATTTTCTGGAAGTATTAAAAGTACTGGTGGCTCTGGAGCTTGTTCAATTCAACTACTCATGACTGAAATGTTGAATCTGAAGTACATTTTTGGAGAGGGGATTGTTGGAAACATAGCTCTTAAAGGGGATCATTCTTGGGTTTTCAGTGAGAATGTCTTTACAAGTAATTTCAACTCTAATTTAATCTCTGAGTGCCCTTATGAATGGCTTCTTCAATTTGCATCAGGCATCAAGACTATTGTGCTCGTACCAGTTCTTCCTTATGGAGTTTTGCAATTTGGTTCATTTGAAGCGGTTGCTGAAGACTTGGCATGGGTTGCCACTATCAAGGAGAACTTCAATTCTATGTATTGTGCTGGGGATGAGAGTTGCATGCTTGGGGAAGATCTGCTGGAATCTCTCAAAAAAGCAGACAAAAGTCAGATCAGTTTCCCGTACATTGGGGTTTCAAATGATCCAAGATACATAGGTGAGGCAGAGCTGAATGTGAGCCAAATGGAAGAGAAGTTATCAGCCTGTTCTCAGTGGGTCAATAAGATGGGAATATTCGGTGAGACGTCAAATGGATTATGCTCTTACTCTAGTAAAGATATGGCAGAACCACAATTGGGAGGTACTGACACTGATCATGGAAGTTGTCAGGACGTGCATGGTTCATTCGATGTTTCCTTCTGTTGTGAATTATACAATGCACTTGGACCTGTTTCTAGTGGACAGACTTCTGAATCTCTGTCAAAATATTTCTCTTTTGAGGAGACATACAGTAGCTCAACTTTGATGTCTGATGGGAGAGGGCAGGATCATGTCAATGATATACAGTTTCTCAAGGAAGGTAACTCAGAATATCTTTTGGATGCTGTTGTTGGCAATTTAGACAGTGCTTCAGATGATACTTCATTAAGTCTAACCAATGGTGATAAGCCTCCTATAACCATGCCAAGAGAAAATACTGCTTCCATTCCTCCACAAGGTCATTCTGAAGAAAGCACTTTGATAGTGAATAATTCAGATCCTAGAAGCCATATGACTCCTGCATTTATAGCTAAATGCATGAATGATTCTGGTACCCTTACATCGGGATCTTTTGATGGAAATTCAAGCATATTGATTGATGAGACACAGCAGGAGAAGGTTTATGGTCATATGCAGCCTAAAAGTGGGCCAAAGCTTTCTAGCACCTGCAAGAAAAGAGCCAGGCTTGGTAATACCAGAAGGCCAAGACCAAGGGATAGACAGTTGATCATGGACAGGATGAAGGAATTGAGGGAACTCGTCCCAGACGGTGCTGGGTGTAGCATTGACAGCCTCTTGGAAAGGACAATAAAGCACATGCTGTACTTGCGTAATATAACAAACCGGGCTGAGAAATTAAAACAATGTCAGCTTCAGGAGGTGCCTGAGTGCAAGAAACAGAAAATCAATGACAGCCATGCCGGAAGGAGCTATGCGTTAGACTTTGAAAGTGAACTCCAAGTGTGCCCCATAATTGTTGAAGATCTTGGATGCTCAGGGAACATGCTCATAGAGATGATATGCAACAAGCAAGGACTTTTCTGGGAGATTGCCCTCGTGATCCAGCAGATGGAGCTTGCGATCTTGAAAGGCGTTTTAGAAAGCCGTTCAGGCACCATGTGGGCTCGTTTCATTGTCGAGGTTCCCAGAGGTTTTCACAGAATGGATATTATGTGTCCTCTGTTGCATCTTTTGCAGCTTAAAAGTAGCCCTGTCTCCACTAGAATTTGA 1941 0.4183 MEVTSITYLLKSLCDYTHWNYAVFWKLNYYLPLTLTWEDGYYGYQKANEAMESMCSDINFEASDEVFSGSIKSTGGSGACSIQLLMTEMLNLKYIFGEGIVGNIALKGDHSWVFSENVFTSNFNSNLISECPYEWLLQFASGIKTIVLVPVLPYGVLQFGSFEAVAEDLAWVATIKENFNSMYCAGDESCMLGEDLLESLKKADKSQISFPYIGVSNDPRYIGEAELNVSQMEEKLSACSQWVNKMGIFGETSNGLCSYSSKDMAEPQLGGTDTDHGSCQDVHGSFDVSFCCELYNALGPVSSGQTSESLSKYFSFEETYSSSTLMSDGRGQDHVNDIQFLKEGNSEYLLDAVVGNLDSASDDTSLSLTNGDKPPITMPRENTASIPPQGHSEESTLIVNNSDPRSHMTPAFIAKCMNDSGTLTSGSFDGNSSILIDETQQEKVYGHMQPKSGPKLSSTCKKRARLGNTRRPRPRDRQLIMDRMKELRELVPDGAGCSIDSLLERTIKHMLYLRNITNRAEKLKQCQLQEVPECKKQKINDSHAGRSYALDFESELQVCPIIVEDLGCSGNMLIEMICNKQGLFWEIALVIQQMELAILKGVLESRSGTMWARFIVEVPRGFHRMDIMCPLLHLLQLKSSPVSTRI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0345 646 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 464 513 IPR011598 GO:0046983
Dere11g0345 646 MobiDBLite consensus disorder prediction 382 404 - -
Dere11g0345 646 MobiDBLite consensus disorder prediction 445 476 - -
Dere11g0345 646 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 262 641 IPR043561 GO:0003700|GO:0006355
Dere11g0345 646 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 179 IPR025610 -
Dere11g0345 646 MobiDBLite consensus disorder prediction 362 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0345 Dere-ChrDere11 5913616 5918193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0345 10 636 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 28.614 4.39e-67 230