Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0336 ATGGCTTTTTGCCGCGTTAATTTAACGTCTAATCTCCAGTTTCCGTCCGATTCGCCGCGTATTTCTTCCCCATGTCAACTTCAAATTCGAAATCCCACCCACTTCTCACTCGCTAGCCTATTTCCTTCTCCTCTGTCCAAAACCAGAAAGATCTCCTCTCTCACTGTTCGGCGCCGTAGCTCTGGGGCTATGACGTCTCACATGACTATGGAGGAGAAGCCCATTTCTGAGAACAAAATGCTTGTTTATGTGCCTCCGCATCCGTTGATTAAGCACTGGGTTTCAGTTCTGAGGAACGAACAGACTCCTTGTCCTATCTTTAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCAACTGTCACAGGAGAGATTCAGTCACCAATGGGTGTTGCCTCTGTAGAGTTCATAGATCCAAGGGAGCCTGTGGCTGTAGTTCCAATTTTGAGAGCTGGCCTTGCTCTTGCAGAACATGCATCATCAATCTTGCCTGCAACAAAAACATATCATCTAGGAGTATACAGAGATGAGGAAACGCTGCAGCCAACTATATATCTGAATAAGTTACCTGATAAGTTTCCAGAAGGATCTAAAGTGTTTGTGGTTGATCCTATGTTGGCAACAGGTGGTACTATATTGGCAGCTCTCAAACTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCCCTTCAGAAGCTGAGTGAGCAATTTCCTGGTCTTCATGTGTATACTGGAATTATTGATCCCACAGTCAATGACAAAGGGTTCATAATTCCTGGCCTTGGAGATGCAGGGGACCGCAGCTATGGTACATGA 876 0.4566 MAFCRVNLTSNLQFPSDSPRISSPCQLQIRNPTHFSLASLFPSPLSKTRKISSLTVRRRSSGAMTSHMTMEEKPISENKMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVTGEIQSPMGVASVEFIDPREPVAVVPILRAGLALAEHASSILPATKTYHLGVYRDEETLQPTIYLNKLPDKFPEGSKVFVVDPMLATGGTILAALKLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0336 291 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 83 268 - -
Dere11g0336 291 CDD PRTases_typeI 147 267 IPR000836 -
Dere11g0336 291 SUPERFAMILY PRTase-like 82 290 IPR029057 -
Dere11g0336 291 Pfam Uracil phosphoribosyltransferase 84 291 - -
Dere11g0336 291 Gene3D - 69 291 IPR029057 -
Dere11g0336 291 FunFam Uracil phosphoribosyltransferase 79 291 - -
Dere11g0336 291 NCBIfam uracil phosphoribosyltransferase 82 291 IPR005765 GO:0004845|GO:0006223
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0336 Dere-ChrDere11 5810535 5815312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0336 16 291 PRT Gene Family AT3G53900 68.705 1.13e-136 386