Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0260 ATGCCTTCATCTTCCACAACCATAATTTCCAAATGCACTATCTACCCAGATCAGAAATCCGCCATTAAAACTCTCAAGCTTTCCGTCTCTGATCTCCCTATGCTTTCCTGCCATTACATTCAAAAGGGGGTGTTGCTACCACTCCCGCCTTACTCCTTTGACGACCTCCTCGTCTTCCTCAAGCACTCCCTCTCCGTCGCTCTCTCCCATTTCCCCGCCCTCGCCGGCCGCCTCACCACCGACGACCTCGGCTATGTCCACATCCTCTGCAACGACGCCGGCGTCGACTTTATTCAGGCCAAGGCAAAACACCTTGCCATCGACACGATTTACAATCCTGAGCTTGTTGACGTTCCCTATTGCTTCAAGGAATTCTTCGCCTACGACAACACTATCTCCTACTCCGGTCACCACAACCCCCTCGCCGCCGTCCAGGTCACCGAGCTCGCGGACGGCGTGTTCATCGGATGCACCGTGAACCACGCCGTCACCGACGGGACTTCGTTCTGGCACTTCTTTAACACCTTCGCCGAGATCTGCAAGGGCGCGAAGAAGATATTGAAGTCGCCGGACTTCACCCGCGACACTGTTTTCAACTCCGCTGCCGTGCTGAGAGTCCCCGCCGGCGGCCCGAAGGTCACCTTTGATACCGACGCGCCTCTCCGGGAGAGAGTTTTCCATTTCAGCAGAGAAGCGATTCAGAAGCTGAAGCTCAGAGCCAACTGTGGCAGCCATAGTAACGGTTTCGCGGATTCCACGGAGGTAATGGGGAAGAAAGTTAACGACAGTTGGAAAACCGTTACCGGCGTTACTAACGGAAAGATAACGCCCGTTAGCAACGACTTGCCAGCTAGGAAAGATGAGATCTCGTCGTTTCAATCGTTATCTGCTCAGTTGTGGCGTTCCGTGACACGTGCGAGGAAGCTGGACCCCTCCAAAACGTCGACGTTTCGCATGGCGGTGAACTGCCGCCACCGTTTGAGGCCGAAGATGGACGCTTACTACTTCGGCAACGCGATTCAGAGCATCCCGACCGTCGCTGAAGTCGGCGATATTCTGTCTCGGGATCTCCGGTGGTGTGCGGATCTGCTCCATCAAAACGTCGTCGCACACGACGACGCTATGGTGCGCCTCGGCATAGAGGATTGGGAGAAGGCTCCGAGGTTGTTTCCGTTGGGGAACTTCGACGGCGCGATGATCACCATGGGCAGCTCTCCGCGTTTTCCGATGTACGACAACGATTTCGGGTGGGGCCGACCATTGGCGGTTAGAAGCGGCAAGGCTAACAAGTTCGACGGGAAGATCTCGGCGTTTCCGAGTAGAGAAGGAAACGGAAGCGTCGATCTCGAAGTCGTTTTGGCGCCGGAGACGATGGACGGACTAGAAAACGACATGGAGTTTATGCAGTACGTGTCGCCGATCGAGTGA 1428 0.5546 MPSSSTTIISKCTIYPDQKSAIKTLKLSVSDLPMLSCHYIQKGVLLPLPPYSFDDLLVFLKHSLSVALSHFPALAGRLTTDDLGYVHILCNDAGVDFIQAKAKHLAIDTIYNPELVDVPYCFKEFFAYDNTISYSGHHNPLAAVQVTELADGVFIGCTVNHAVTDGTSFWHFFNTFAEICKGAKKILKSPDFTRDTVFNSAAVLRVPAGGPKVTFDTDAPLRERVFHFSREAIQKLKLRANCGSHSNGFADSTEVMGKKVNDSWKTVTGVTNGKITPVSNDLPARKDEISSFQSLSAQLWRSVTRARKLDPSKTSTFRMAVNCRHRLRPKMDAYYFGNAIQSIPTVAEVGDILSRDLRWCADLLHQNVVAHDDAMVRLGIEDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPSREGNGSVDLEVVLAPETMDGLENDMEFMQYVSPIE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0260 475 Pfam Transferase family 6 468 - -
Dere11g0260 475 Gene3D - 6 206 IPR023213 -
Dere11g0260 475 SUPERFAMILY CoA-dependent acyltransferases 60 182 - -
Dere11g0260 475 Gene3D - 208 464 IPR023213 -
Dere11g0260 475 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0260 Dere-ChrDere11 4823010 4824437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0260 60 462 Monolignol Biosynthesis Gene Families AT5G48930 27.924 1.54e-34 132