Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0244 ATGGACAGAGGTGCTCTGTACAATCCTCATACGGTTGAGGAGGTCTTCAGGGATTTCAAGGGCCACCGAGCTGGCATGATTAAGGCCCTCACTACCGAGGTTGAAAAGTTCTATCAGCAGTGTGATCCGGAGAAGGAAAACCTTTGCCTTTATGGATTCCCTAGTGAGCAGTGGGAAGTCAATCTGCTTGCTGAGGAGGTGCCTCCAGAGCTTCCAGAACCAGCATTGGGTATTAACTTTGCCAGAGATGGGATGCAAGAAAAAGACTGGCTATCTTTGGTTGCTGTGCACAATGATGCATGGTTACTTGCTATAGCCTTTTATTTTGGGATGGCCAAGAAACAAGGAAAGGAGAAGTCATCAGTTTCTAATCATAGTAGTAACAAATCCAAATCAAACTCCAAAAAAGGCTCTGAATCTCAGGGAAAGTATTCAAAGGCAATACAACCAAAAGGAACACTGGGAAGAGATGAGAGGAGCGAGGGATTGAGACAAAACCAGGTACCCAAAGGTTAA 516 0.4516 MDRGALYNPHTVEEVFRDFKGHRAGMIKALTTEVEKFYQQCDPEKENLCLYGFPSEQWEVNLLAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHNDAWLLAIAFYFGMAKKQGKEKSSVSNHSSNKSKSNSKKGSESQGKYSKAIQPKGTLGRDERSEGLRQNQVPKG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0244 171 Pfam Alfin 11 115 IPR021998 GO:0006355|GO:0042393
Dere11g0244 171 MobiDBLite consensus disorder prediction 121 147 - -
Dere11g0244 171 MobiDBLite consensus disorder prediction 118 171 - -
Dere11g0244 171 PANTHER CPG BINDING PROTEIN 8 120 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0244 Dere-ChrDere11 4326370 4327579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0244 4 151 Alfin-like Transcription Factor Family AT3G42790 61.017 1.15e-59 184