Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0192 ATGGCCGCTTCCGCTTCCGCCGCATCTTCCCTCATCGGCACCCGCCTCCCCGACGTGCACTCCAATTCGGGTCGGGTCATGGCTCGATTCGGGCTTGGGAAGAAGAAAAGCGCGCCTAAGAAAGCAACGAAGCCTAGCCTCGATAGGCCACTGTGGTACCCTGGGGCGAAGGCGCCGGAATGGCTGGACGGAAGTCTCGTCGGCGATTACGGTTTCGACCCGTTCGGATTGGGCAAACCCGTGGAGTACTTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTTGCGAAGAATTCGGCAGGGGAAGTGATCGGGACACGAACCGAGAGTGCCGATGTCAAATCGACGCCATTCCAGCCTTACAGTGAGGTGTTCGGGTTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGACGGTGGGCCATGCTGGCTACGCTCGGCGCCCTCTCCGTAGAGTGGCTCACCGGCGTTACCTGGCAAGACGCCGGAAAGGTTGAGCTTGTTGAGGGTTCATCCTACCTTGGCCAACCACTTCCCTTCTCAATCACCACATTGATCTGGATTGAGGTTCTGGTGATCGGCTACATTGAGTTCCAACGGAACGCCGAGCTCGACCCCGAGAAGCGGCTCTACCCCGGTGGCAAGTTTTTCGATCCACTTGGCTTAGCTGCCGACCCGGAGAAGAAGGCCACCCTCCAACTGGCAGAGATCAAGCATGCCCGTCTCGCCATGGTTGCCTTCCTTGGCTTTGCAGTTCAAGCTGCAGTCACGGGCAAAGGCCCTCTGAACAACTGGGCTACCCACTTGAGTGACCCTCTTCACACAACCATCATTGACGCTTTCACATCCTCCTCTTAA 858 0.5804 MAASASAASSLIGTRLPDVHSNSGRVMARFGLGKKKSAPKKATKPSLDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPVEYLQFDLDSLDQNLAKNSAGEVIGTRTESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDAFTSSS 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0192 285 Gene3D Chlorophyll a/b binding protein domain 52 285 - -
Dere11g0192 285 Pfam Chlorophyll A-B binding protein 58 254 IPR022796 -
Dere11g0192 285 FunFam Chlorophyll a-b binding protein, chloroplastic 104 283 - -
Dere11g0192 285 SUPERFAMILY Chlorophyll a-b binding protein 42 283 - -
Dere11g0192 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 282 IPR001344 GO:0009765|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere11g0192 Dere-ChrDere11 3139390 3141120 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0192 11 284 Chloroplast and Mitochondria Gene Families AT3G08940 85.455 8.00e-177 487