Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0187 ATGGCTGCAGAATTCACGAATGGTACTAACGGCTCTTTGAAGCACTTGAGTCTCAGTGACACCAAGGGCAAGATCATCACTTGCAGAGCTGCCGTCTGTTATGGCCCCGGAGAGCCCTTGGTTATAGAGCAAGTTCAAGTTCAGCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCCATCTGCCATACCGATCTCAGCGCGTGGCTTGGCGAGAATGAGGCTCAAAGGGCTTATCCTCGGATTCTCGGCCATGAAGCACTTGGGGTGGTGGAGAGTGTGGGTGAGGGTGTGAAGGACTTGAAGGAAGGAGATTACGTGGTGCCTCTGTTCAACGGGGAGTGTGGGGACTGTGAGCTGTGCAAGTGCGACCAAACCAACATGTGCCAGAGGTTCGGAGTGAACCCCATGAAGAAGGTGATGGCCGGCGACGGCGCCACCAGGTTCGCCACAGCGGATGGCGGACACCCCATCTTCCATTTTCTCAACACCTCCACCTTCACGGAGTACACCGTCGTGGACTTCGCCTGCGTCGTCAAACTTCACGGTAACGGCGACGGAAAAGCCGAGAATGACCTCAAGAAGCTCACGTTACTAAGCTGTGGAGTGTCCACCGGAGTTGGAGCAGCATGGAACACCGCCAATGTGACGTCCGGTTCAACCGTGGCGGTCTTTGGTTTGGGCGCCGTTGGTCTCGCCGTAGCTGAAGGAGCACGAGCTAGAGGTGCTTCCAAAATAATTGGGGTTGACATCAACTCCAACAAATTCATCAAAGCCCGAGCAATGGGGGTCACAGATTTCATAAACCCTAAGGATGAAGAGAAGCCAGTTTGTGAGAGAATAAGGGAAATGACTGGAGGAGGAGTACACTACAGCTTTGAATGTACAGGAAACTCAGATGTCCTCAGAGATGCCTTCTTGTCTGTTCATGAGGGTTGGGGACTGAGTGTAATATTGGGAATTCATGCAACACCAAAAATGCTTCCAATCCATCCAATGGAGCTGTTTGCAGATAGGAGAATAGTTGGTTCAGTCTTTGGAGGCTTCAAAGGGAGGACCCAGCTTCCTCATTTTGCCAAACAATGCATGAATGGGGAGGTAAATCTGGAGGAGTTCATCACTCATGAGCTTCCCTTTGATGAGATTAACAGAGCCTTTGATCTTTTGGTCACTGGAAAGTCACTGAGATGTCTTCTACACCTCTAA 1215 0.5086 MAAEFTNGTNGSLKHLSLSDTKGKIITCRAAVCYGPGEPLVIEQVQVQPPQKMEVRIKILFTSICHTDLSAWLGENEAQRAYPRILGHEALGVVESVGEGVKDLKEGDYVVPLFNGECGDCELCKCDQTNMCQRFGVNPMKKVMAGDGATRFATADGGHPIFHFLNTSTFTEYTVVDFACVVKLHGNGDGKAENDLKKLTLLSCGVSTGVGAAWNTANVTSGSTVAVFGLGAVGLAVAEGARARGASKIIGVDINSNKFIKARAMGVTDFINPKDEEKPVCERIREMTGGGVHYSFECTGNSDVLRDAFLSVHEGWGLSVILGIHATPKMLPIHPMELFADRRIVGSVFGGFKGRTQLPHFAKQCMNGEVNLEEFITHELPFDEINRAFDLLVTGKSLRCLLHL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0187 404 Pfam Zinc-binding dehydrogenase 232 352 IPR013149 -
Dere11g0187 404 SUPERFAMILY GroES-like 353 403 IPR011032 -
Dere11g0187 404 SUPERFAMILY GroES-like 21 228 IPR011032 -
Dere11g0187 404 Gene3D - 209 347 - -
Dere11g0187 404 PANTHER ALCOHOL DEHYDROGENASE 23 401 - -
Dere11g0187 404 FunFam S-(hydroxymethyl)glutathione dehydrogenase 209 347 - -
Dere11g0187 404 Gene3D - 31 399 - -
Dere11g0187 404 Pfam Alcohol dehydrogenase GroES-like domain 54 148 IPR013154 -
Dere11g0187 404 FunFam Alcohol dehydrogenase 6 31 221 - -
Dere11g0187 404 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 196 368 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0187 Dere-ChrDere11 3078008 3084676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0187 54 393 Monolignol Biosynthesis Gene Families AT2G21890 25.770 7.82e-13 67.4