Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0184 ATGATGCAGTATTTATATACAGTATGGCTCATAGTCGCTTACTCACGAAAGATACATGTAAGCTACAACGCAATACAGTCCACTCAGGCACTCAAAGTTCACGACGCTTGCCATCTTCTTCAAAATTCCAACTCAGTCCTTTTTCTGAGACGAAGAAGCGCGAAAATGGCTTCTCACCAAGAAGCATGGCTCTTGGAGAATGGGAACCTCAAGGAATCCGGCAAGGAGATCATGAGGCATGGCCGTTCGGCTCGCAAGATGTCCTCTTCCTCCTTGCGCAAGAAATCTGACCTTAAGCTTGTTTCCAAAGTTCCCTGTTCCTTGCTCAGAAATCTGTTGGCTAATCTGCAAGAGGTCATTCTGGGGACTAAGCTCTCGATTCTTTTCCCTGCCATTCCTCTTGTCTTTCTTGCCGACTGCTATGGCTTTGGACGACCCTGGGTCTTTGCGCTGAGCTTACTAGGTCTTACACCACTTGCAGAACGAGTCAGCTTCCTGACAGAGCAAGTTGCTTACTACACTGGTCCCACAGTGGGAGGGCTTCTGAATGCGACATGTGGAAATGCTACAGAGCTCATAATAGCAATATTTGCTCTTAGCAACAATAAAATAGCTGTAGTCAAGTATTCTCTCTTAGGTTCCATCCTTTCAAACCTTCTCCTAGTTCTTGGAACCTCTCTTTTCTGTGGTGGCATCGCAAACGTTGGACTGGAGCAAAAATATGACAGAAGACAAGCAGACGTGAACTCACTTATGCTTCTGCTGGCATTGTTGTGCCACTTGCTGCCAATGCTATTCAGATATGCTAGTGCCTCGGCTGCTCTCATTGCAGATCCATCTCTCCAATTGTCAAGAGCTGCTAGCATTGTGATGTTGATTGCATATTTTGCTTACCTTGTCTTTCAACTGTGGACGCATCGCCAATTATTTGAAGCCCAGGATGACGAAGATGGTAACAACGTTTCAGAAGAAGCAGCAGTGATAGGATTCTGGAGTGGGTTTGCCTGGTTGGTTGGGATGACTGTGTTCATAGCTCTGTTGTCTGAGTATGTGGTCGCGACAATAGAGGATGCATCGGACTCATGGGGCCTGTCTGTCAGTTTCCTCAGCATAATTTTGCTACCAATTGTAGGCAATGCAGCTGAACATGCAGGAGCAATTATCTTTGCTTTCAAGAACAAGCTGGACATCTCACTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTGGCTTGTTCGTGGTTCCCCTATGTGTGATTGTATCGTGGATAATGGGCAACAACATGGACCTTAACTTCAATATCCTTGAAACGGGTTCACTTGCTTTAGCCATAATTGCCACTGCCTTCACTTTACAGGATGGAACTTCCCATTACATGAAAGGCTTTATTCTGCTGCTCTGCTACGTTGTTATTGGGGCATGCTTTTTCGTACAGAGAACACCATTGAACCAAGCTCATAGCTTAATAGGCTCTGGTCTCTTTGGATCACTTCCATGA 1497 0.4562 MMQYLYTVWLIVAYSRKIHVSYNAIQSTQALKVHDACHLLQNSNSVLFLRRRSAKMASHQEAWLLENGNLKESGKEIMRHGRSARKMSSSSLRKKSDLKLVSKVPCSLLRNLLANLQEVILGTKLSILFPAIPLVFLADCYGFGRPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANVGLEQKYDRRQADVNSLMLLLALLCHLLPMLFRYASASAALIADPSLQLSRAASIVMLIAYFAYLVFQLWTHRQLFEAQDDEDGNNVSEEAAVIGFWSGFAWLVGMTVFIALLSEYVVATIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIGLFVVPLCVIVSWIMGNNMDLNFNILETGSLALAIIATAFTLQDGTSHYMKGFILLLCYVVIGACFFVQRTPLNQAHSLIGSGLFGSLP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0184 498 NCBIfam calcium/proton exchanger 130 476 IPR004798 GO:0006816|GO:0015369
Dere11g0184 498 NCBIfam calcium/proton exchanger 111 476 - -
Dere11g0184 498 FunFam Vacuolar cation/proton exchanger 176 320 - -
Dere11g0184 498 FunFam Vacuolar cation/proton exchanger 321 477 - -
Dere11g0184 498 Gene3D - 176 322 IPR044880 -
Dere11g0184 498 Gene3D - 323 476 IPR044880 -
Dere11g0184 498 Pfam Sodium/calcium exchanger protein 333 471 IPR004837 GO:0016020|GO:0055085
Dere11g0184 498 Pfam Sodium/calcium exchanger protein 147 304 IPR004837 GO:0016020|GO:0055085
Dere11g0184 498 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 79 480 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0184 Dere-ChrDere11 3057113 3061508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0184 61 484 Antiporters AT2G38170 71.889 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0186 12 3279413 3283104 Dere11g0184 11 3057113 3061508 CCT