Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0177 ATGATGGACGTGAGTTCGCGGGAAAAGCTCGCGAGTCTCGTGAACTCAGCCAAGCTGGCCGTGGATATTCCCTCCAAGCTCGGTTACTTGCGGCAACTGAAGCTAGAGTTGCCCCAAGAAGACCCCGTTTTGCTCATTGAGTTTCTCCCTTCCCTCTTCGAGTTTCAGTCCGACCGCTTTAGTCCAGTTCGCAAATTTGTCACCGAGATGCTTGGTGAAATTGGATCTAAAAACACAGAGTTCTTGCCTGACATTATACCTGTGCTCATTTCTATTTTGGATGATGATACACCTGTTGTTGTTCGACAAGCTATATCATGTGGAATTAATCTATTTCATTCCACTCTTGAGAAAATTGCAATACAGGGTTTATACTCTAGTGATCTGGATGGTGCACTTGAATGTGCATGGGCATTGATGGTAAAGTTCAAAGACAAAGTATACTCACTTGCTTTTCAACATGGAAGTGGTGGTACAAAGTTGCTGGCACTGAAATTTGTTGGATTTGTTATTCATCTATACACGCCTGATCCAAATGGATCCTTAGAGCCGCCTACTCATCAAGGAGGGCTTGTGGAGTTTAATATATCATGGATTCGGAGGGGTCATCCTGTACTAAATTTTAAAGATTTGTCAATTGAAGCTAGTCATAGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCAACAGTGAATTCTCTTGGTAACTCAGTGATCATTGTGCTAATTAACAGCCTTTCAGCCATTGCAAAGGATAGGCCAACATTTTATGGCCGCATCTTGCCAGTTTTGCTTAGTTTGGAACCATCAAGCTCTGTTGTTAACGGGGTACGTGTATCAGCTACACACCATGCATTGAAGAAGGCCTTTCTCACTTGCTTGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGAACGTTTGGCAGGTGCTTTGGAGGAGATGCAGTCTGAGGGGATGGCAGACCGGGTTTTCCACCAAGTTTCCAAGATTAATGGAAGTATGGGAAAAGAGAAAGATGATGATCTAGTTATTAAGGAAGAAAAGCCTACAACAGATTCATTTGATTCAGCGCACAAAAATTCAGGGAGGAAACGATCAGGGTCACAGGATGGAGGTGATTTAGCTGAAGATGAAGATATTCCTGAAAAGCGTGTCAAAACAACAGCCAGTGTCTTAGAACCTAAGAAAGAGTTAGATGGAAGTACGACAGTTTCTGAGGATAACAATCCTTCAACTGTACCAATCTCATCAAAAGGAGATGTGGATAATGGGCCTGTTCAGCAACTTGTTGCAATGTTTGGTGCTTTGGTTGCTCAAGGAGAAAAAGCTGTTGCGTCTTTAGAGATTCTTATCTCAAGTATTTCCTCAGACTTGCTAGCTGAGGTGGTAATGGCTAATATGTGTAACCTACCTCCAATTTATCCAAATGCTGAAGGAGATGATGAGCCGCTGCATGACATTAGTATAATTGGTTCTGATGTCAAGGCTAAATATCCGCCATCATTTGTAGCTGGCGTTATGTCACTTTCTAGTACTTTCCCACCCATTGCTTCACTTCTTGATGCTAATCATTCAGTATCCAATGAGAGATCTCAAGGGGAGGAGGAAAATTCTGCAACTGGAGCAGATAGTAACGTGCATTCTAGCTTGAATCATTCATCTGAAAATGTAATGTTGCCCACCGACTTTCCATCTTCTGATGCCAAAATACCTGGAATGGAGAATGTCAGCACAACTGTGTCTTCTGACATCCAGGATGTGGGCACTATAGAGAGTGGAATCCCTGGCCTGGATTCTTTTTCTCGTAATGATGTCATGTCAGAAACTGTAGCTGCTTCGTCAGATACAGAAGAAGCCAGTCAAGAACAAGTTATGAGTTTGGGTCAAAGATCACCCCTGAACATAGTTCCATCAATGTCAACAGATAGGTCTGAGGAGATAAGCCCAAAATCAGCTGTTGCAGATGTAAATAGTGTGGTATCCTCAACAGCAACTTCTGACAGGTTGTCTTCTCGGTTGGTCCTGCCAAAGATGAATGCTCCTGTTGTTGATCTTGCAGATGAACAGAAGGATAATTTGCAAAAATTGGCTTTTGTTCGTATTATTGATGCCTATAAGCAAATAGCAGTAGCTGGAGGATCAAAAGTTCGATTTTCAATACTTGCTTATCTAGGAGTTGAGCTTCCCTTGGACCTAGATCCATGGAAACTATTGCAGAAGCATGTCTTGGTTGATTATACAAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGATTTCTTTTCCTCGACAACAGCTGCTTCTGTATATGAAGCATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCTTCAGATAAATCGCTGAGTAGATTGCTTGGTGAAGCTCCTTATTTGCCAAAGTCAGTTTTAAAAGTTTTAGAGAACATGTGCTCTCCTGGAAATTCTGATAAAGTTGAAAAGGAGTCACTGAGTGGGGATAGAGTTACCCAAGGTCTCAGTGCTGTATGGAGTCTGATTCTGCTGAGGCCTCCCATTCGAGATACCTGCTTGAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAGGAGGTGCGGATGAAGGCAATTCGTCTGGTGGCAAATAAGCTTTATCCTTTAACATCCATTTCTCAGCAAATAGAAGATTTTGCTAAGGAAATGTTGTTCTCAGTGATGAATGGTGATGCATCTGAAGCAACTGATGCTGAAAGATCTATTGCTGAAACACAAAAGGGACCTGATAATGAAAAGTCTTCTAATGAACCATCATCAGTGAGTGGCAGCAGTAAGGATATCTGCTCTGATAATCGCCAGTCATCTACATCTGAAAGTGTCTCACTGATTTCTGTATCTGAGGCTCAGAGATGCATGTCACTGTATTTTGCTCTGTGTACTAAGAAACATTCTCTCTTTCGACAAGTATTTGTCATCTATAGAGGCACATCAAAGGCGGTCAAGCAGGCAGTTCATCGTCATATCCCTATTCTAGTCCGCACTATGGGCTCTTCTTCAGATCTCCTTGAAATTATTTCAGATCCCCCGAATGGAAGTGAGAACCTCCTAATGCAGGTGTTGCACACACTTACTGATGGGACAATCCCTTCTAAGGATTTAATATTTACTGTCAAAAGGTTACATGATTCAAAAGTTAAGGATGCAGAGGTTCTTATTCCTATATTGGCATATCTGCCAAAAGATGAGGTTATGCTGATCTTTCCTCACATTTTAAATCTTCCTCTGGATAAGTTCCAAGCTGCTCTTGCTCGCATGTTACAGAAATCTCCACATGCTGGTCCGGTGCTTACTCCGGCTGAAGTATTATTTGCTATCCATGGAATTGATCCTGAAAGAGACGGAATTCCCTTAAAGAAGGCAGGTTTATTTTTAAAATCTTGGTTGGTTACAGATGCATGCAATGCTTGCTTTGAGCAGCGGCAGATTTTCACTCAAGAAGTTCTTGCTAAAGTTCTGAATCAATTGGTTGAGCAAATCCCTCTTCCTTTATTGTTCATGCGGACAGTATTACAAGCTATTGGTGCCTTTCCAACACTGGTGGACTTTATAATGGGAATTCTCTCTCGTCTTGTGGGGAAGCAGATATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGTCCAATTGACGAAACCCCAATCATTTGGTGTTTTGCTTCAGCTACCTCCAGCCCAATTGGAAAATGCCTTAAATAGATCTGCAGCACTAAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATCCAATCTTCACTACCCAGGTCCGTGTTGGTTGTTCTGGGAATTGCCTCAGATCCTCAGGTTTCAAGTCAGGCACAAACTAGTCAAACACAGATAAGTGAGACATGCAACTCTGACAAGGAAACAGCGACCGAAAAATCTAAAGAATCATCTTCAGCTAGCTGA 3999 0.4241 MMDVSSREKLASLVNSAKLAVDIPSKLGYLRQLKLELPQEDPVLLIEFLPSLFEFQSDRFSPVRKFVTEMLGEIGSKNTEFLPDIIPVLISILDDDTPVVVRQAISCGINLFHSTLEKIAIQGLYSSDLDGALECAWALMVKFKDKVYSLAFQHGSGGTKLLALKFVGFVIHLYTPDPNGSLEPPTHQGGLVEFNISWIRRGHPVLNFKDLSIEASHSLGLLLDQLRFPTVNSLGNSVIIVLINSLSAIAKDRPTFYGRILPVLLSLEPSSSVVNGVRVSATHHALKKAFLTCLKCTHPSAAPWRERLAGALEEMQSEGMADRVFHQVSKINGSMGKEKDDDLVIKEEKPTTDSFDSAHKNSGRKRSGSQDGGDLAEDEDIPEKRVKTTASVLEPKKELDGSTTVSEDNNPSTVPISSKGDVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISSDLLAEVVMANMCNLPPIYPNAEGDDEPLHDISIIGSDVKAKYPPSFVAGVMSLSSTFPPIASLLDANHSVSNERSQGEEENSATGADSNVHSSLNHSSENVMLPTDFPSSDAKIPGMENVSTTVSSDIQDVGTIESGIPGLDSFSRNDVMSETVAASSDTEEASQEQVMSLGQRSPLNIVPSMSTDRSEEISPKSAVADVNSVVSSTATSDRLSSRLVLPKMNAPVVDLADEQKDNLQKLAFVRIIDAYKQIAVAGGSKVRFSILAYLGVELPLDLDPWKLLQKHVLVDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEAFLLTVAEALRDSFPPSDKSLSRLLGEAPYLPKSVLKVLENMCSPGNSDKVEKESLSGDRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLTSISQQIEDFAKEMLFSVMNGDASEATDAERSIAETQKGPDNEKSSNEPSSVSGSSKDICSDNRQSSTSESVSLISVSEAQRCMSLYFALCTKKHSLFRQVFVIYRGTSKAVKQAVHRHIPILVRTMGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIFTVKRLHDSKVKDAEVLIPILAYLPKDEVMLIFPHILNLPLDKFQAALARMLQKSPHAGPVLTPAEVLFAIHGIDPERDGIPLKKAGLFLKSWLVTDACNACFEQRQIFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVGKQIWKYPKLWVGFLKCVQLTKPQSFGVLLQLPPAQLENALNRSAALKAPLIAHASQPDIQSSLPRSVLVVLGIASDPQVSSQAQTSQTQISETCNSDKETATEKSKESSSAS 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0177 1332 SUPERFAMILY ARM repeat 41 268 IPR016024 -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 939 961 - -
Dere11g0177 1332 Pfam Symplekin tight junction protein C terminal 1075 1262 IPR022075 -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 404 421 - -
Dere11g0177 1332 Gene3D - 2 339 IPR011989 -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 1297 1332 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 526 566 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 333 394 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 526 562 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 923 961 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 924 938 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 332 421 - -
Dere11g0177 1332 MobiDBLite consensus disorder prediction 1297 1316 - -
Dere11g0177 1332 Pfam Symplekin/PTA1 N-terminal 98 319 IPR032460 -
Dere11g0177 1332 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0177 Dere-ChrDere11 2952567 2973752 Transposed