Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0174 ATGGGTTGCGATCGCACATCAGATGGCTCTGCCAAAGGACGCCTTCGTTGGACTCCTCAACTCCATGATATGTTCGTTGAAGCTGTAACCAGGCTCGGTGGCCCTGAAAGGGCAACACCAAAAAGTATAGTGAAGGAAATGAAGGGGATGGGTGAATCTGATATTACCATTTATCATGTCAAAAGCCACTTACAGGTTACTCCTCCGTTTTCTGCTGGAGGTAAGCATGAGAGGATAAGCATATCTGATATACTCCCAAATTTCAGCACATTAACTGCTCTTCAGCTAAAGGAAGCTCTACATATGCAACTGGAAGCACAAAAACGATTGAACGATCAAATAGAGGTTCAAAGGAGCTTGAAGCTAAAAATGGAAGCTCAAGGAAAGTTCTTGGATAGAATGGGACAAAGTTATCATAACAGAACAGTCCCAAGAAAACCTGGGAAGCCATTGATGACTGAAGCTTCAATCTCACTGCCCTGTCTTTCTGAGGAATCTGATGATCACTCTCATAATGCAAAACACAACGTTGTCACACATAAAAAACAAAGAGTCATAGAAGGTGGTCGTGTTGATTTTCCGACAACCTTGGAGTTCATTGCTTCTTCATCACCATCATCATCAACCTCTCAACAATTCTGCAACCAAAGCTGGGATCTATGGAACCAGCTTGCAGCTTCATGTCCCTCACCTTTGGTTCCTAGCTTTCTGCAGTGA 717 0.4338 MGCDRTSDGSAKGRLRWTPQLHDMFVEAVTRLGGPERATPKSIVKEMKGMGESDITIYHVKSHLQVTPPFSAGGKHERISISDILPNFSTLTALQLKEALHMQLEAQKRLNDQIEVQRSLKLKMEAQGKFLDRMGQSYHNRTVPRKPGKPLMTEASISLPCLSEESDDHSHNAKHNVVTHKKQRVIEGGRVDFPTTLEFIASSSPSSSTSQQFCNQSWDLWNQLAASCPSPLVPSFLQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0174 238 Coils Coil 97 117 - -
Dere11g0174 238 Gene3D - 11 67 - -
Dere11g0174 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 139 IPR044848 GO:0003700
Dere11g0174 238 SUPERFAMILY Homeodomain-like 11 66 IPR009057 -
Dere11g0174 238 Pfam MYB-CC type transfactor, LHEQLE motif 95 134 IPR025756 -
Dere11g0174 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 12 67 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0174 Dere-ChrDere11 2934151 2937578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0174 6 134 G2-like Transcription Factor Family AT4G28610 47.518 6.97e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere11g0174 Myb_CC_LHEQLE 4.2e-17 No_clan