Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0167 ATGACCGATGCAAATGCTGCTTCGTTCGAGGTGTTTCTCGAAGAATGGATGGCGCGCCAAAAGGACTACCTCAACGAGCTAGTCTCTGCTCAGCAACGCCGCGACGAACTTCAAGACGATGATCGGAGAGAGTTGATCTCCCGCGTGCTTTCCCACTACGAGCAATACTACGCAGAGAAATCGAAAATCGCGAACCGCGATATCCTCCTCGTATTCTCTCCGACGTGGTTCAATTCTCTGGAACGAGCCTTTCTCTGGATCGCGGGCTTCAAGCCCGGGATGGTGATTCAGATGGCGAATCAAGCTCTGGATGACTTATCGGAAGAACAGAGGCAGAGAATGAGCGAGCTCAACCACGAGACGAAGCTGGAAGAGCGAGCACTTAACAATGAACTGGCGAAGATTCACGAGAGCGTGGCGGCGGCGCCGCTGGTGGAGGTGGCGAGAAGCCAAGGCCGATTGTGGCTGAGCGAGTCGTACAGAGCAGAGGAGGGTGGTGAAGTACCCGACACGCTGAAGATTGCGTTGGAGCATGTGGTGGCGAATGCAGATATGTTGAGGATAAACACGGCGTTGAAGGTGATGAAGATATTGAAGCCATATCAGGCTGTGAATGTGTTGATCGCCGTGGCTGAGCTTCAGATCAGGATTAGAACGTGGGGTTTCGAGAAAGACGCTCAGGGTGGCGAAGGGTAG 696 0.5359 MTDANAASFEVFLEEWMARQKDYLNELVSAQQRRDELQDDDRRELISRVLSHYEQYYAEKSKIANRDILLVFSPTWFNSLERAFLWIAGFKPGMVIQMANQALDDLSEEQRQRMSELNHETKLEERALNNELAKIHESVAAAPLVEVARSQGRLWLSESYRAEEGGEVPDTLKIALEHVVANADMLRINTALKVMKILKPYQAVNVLIAVAELQIRIRTWGFEKDAQGGEG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0167 231 Coils Coil 13 40 - -
Dere11g0167 231 Coils Coil 100 120 - -
Dere11g0167 231 ProSiteProfiles DOG1 domain profile. 6 227 IPR025422 GO:0006351|GO:0043565
Dere11g0167 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 229 - -
Dere11g0167 231 Pfam Seed dormancy control 24 98 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0167 Dere-ChrDere11 2812581 2813276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0167 4 218 bZIP Transcription Factor Family AT1G08320 25.114 1.35e-18 81.6