Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0159 ATGGAACTACTTTCCGGAATGGTCCTAAAGATTCTACCTTGGCGCTGTGTCAGTTTCTTGATTGGCGCTGATCCACGTCTTCTTTCGAAACTTGACGATCAAATTCGTCGTCTGAGCAGCATGCATGTCGCTCTGAGAGAGAGGATCGATATAGCCACAACAAACGAGGGAGATGTTGCTGATGAGGTTTACATATGGCTGGTTGAAGCTACTCATCTAGTTGAAGAGGGAGAAAAATTTCTCAAGCTATGCATAGGAGGGACATTGCCTCGTAGTGAGATTAGTGCAGAAGCAGAGAACATTATGATGAAGATTGATTTTTTACTAGAGAACGGAAAATTTGACGGAAACATTTACCGGCAGCCTGTGATTTTCGACAGTGAACAAAATATATTGGAGGGGCTTGAGTCAAGAATGAGTATTTGTCGGAGGATTATCGAGGAACTGAGAGACCGAGATGTCGGATTGATTGGGGTGCATGGAATGGGAGGCGTGGGAAAGACCACGCTTGTTAAAGAAGTGGTCAGATATGCTGTTGAGGAAGGGTTATTTGATGTGACAGTCTGGCCTGAAGTGCCAGCAGAAGCATCGTATGTGAGAAGAATTCAAGATGAAATCGCAGAAGGCTTGGGTTTGGGACTTGATCACGAGGAGAGCGAAGCAATGAGGGCGGATATAATCTCTCAAGTGCTGACGAGAAGTGAGAGAAAGGTCCTTATTATTTTAGATGACGTATGGCAGAGGCTTGATTTGTGGAAGATAGGAATTCGCGAGGAATATGGTTTTTACGCTCTCGTGCCTTTCAAGGTTCTTCTCACTTCAAGGAGTATAAAAGCACTAAGGAGCATATCTCATGAGATGAAGATTCTCTCCGTGCCAACCTTAACAGCAGAAGAAGCTTTCTGTTTGTTTCAAAAGCACGTTGAACAAGCTAAATCTGCCGAATTTTCTGCTTTAGCTCAGGGGATAGCAAAGTGTTGTGGGGGTCTTCCTCTGACAATCTTCGAAGTTGCAGGGCAATTAAGCGGTTGTTCGTTATCTGGCTGGCAGGATGCTTTGCAAATATTAAGCAGTTCTGTTATTAACTCAGTCTTGGGCAAAAGGACATTTTCCTGTTTAAATAGAAGTTATGATCATTTGAGAAACAAAGAAGAGGAGTTTATTTTCTTGCTCTGTAGCGTTCTAGGGGAACAGATTGACTGTGAGGATCTCCTCAAATATGCCTTGGGTTTAGGTTTATTCCAAGCCCAAGGCTTGGATACAGTGAGTGCTGTAAAGGACAAATTGTATCATCTGATAAATTCACTCAGAGAATCATGTTTCTTGGAGGATGGAAAAAATAGTCAGTATGTAACCATGAATGACTTAGTTCGTGACTTCGCTTTACACGCCGTGTCCAGAGTTGATGGTGATTGTTTCATTGTCCGAAAACATAGCTGGCAAACATTGCCATGGGAGGAAATGGCTAAGTTTGGCTACATTTCTCTGCAGATCAGCAATATCATGCATGAACTTCCCCAACGTTTGTTGTTTCCTAACCCCAAGCTTTTACATATATATGATGAAAATCGTTCTTCAAAGATTCCGGATGATTTTTTCATTGGGACTGAGGCAGGACTTAGAGTGTTAGCTTTGATCAAAATGCAGTTGCTTTCATTGCCGTCATCACTGCTTGTCCTAACAAACATGGATACTTTGTGTCTGGATTATTGTGAGTTGGGAGATATATCGATGATTGGAGAACTACAGACTTTGAGAGTTCTTAGTCTATCACATACCAACATAGAACAGTTGCCTAAACAAATTGGGCAATTAACTCGTCTGTGTTTGTTGGATTTGAGCAATTGTTCAAATCTTAACGTGATTCCACCTGATGTCTTATCAAGCTTGACCCAACTAGAAGACTTGCGTATGGAGAATAGCTTTAATAATTGGGTGGTTGGAGAAGATAATGATAAAAGCAATGCCAGCCTCGTCGAGTTAACCAGATTGAAGTTTCTGAGTGCATTGAATATCCATATTCCGGATACTAAGATAATTCCGGAAGCCTTCTCCTGGGATCATTTGGATAGGTATGAGATTACGATAGGCCAAGATTTTCCGTGTTCCAGAGAGCGCGAAGCCTTCAAAGTACTGAAATTGAATTACAAGAAAGGCAACATTGAAGGTTCAGAGCATTGGATTAAATTGCTGTTGAAGAGTAGTGAACAAGTATGGTTAAAGGAATTCAAAGGTTTTGAGAATTTTCTTTTAGATTTAAATAAGGGTCGGTGGGAATCATTGAAGCATCTCCATATCCAAGATGATGATGAACTGGAATATTTGACTCCGAAAGTTGTCACCGAAATCTTGGAATCACTAGTTCTCAAGAAATTGAGCAATTTGAGAGGGATAAAACACCGTGAGTTCTTTGATGACCCGTTGGGAAATTTAACAGTTGTGAAGATCGAATGTTGTCCTCGGTTGGAATTCGTCTTCGACGTGAAACGATTTGCTAGGCTCATCCATGTCAGAGAACTGGAGGTAACTGGATGTAAGAAAATGGTAGCTATAGCTCAGATGTCCGGCATGCAACTCATAAATGGAAAACCTTTCTTTGACGGAGTGCCTTGGGAATTTGAGTTCCCTCATTTGCATGCCTTGACACTGCAGGATCTAGATAATCTCTCCGGGTTTTGGAGATTCCAGCAGTTCGATGACCGGGAAATCATTTCGACAAATTCGTTGGCTGGTCTCCCTCGCTTGAGGCATTTGAAGTTGATCCGTATCTGTAGAATTAGACATCTGGTTCTGTCGACTACAGAAGACAGGGTGTTGCCTCTACAAAATTTGAAAACAATGGAAATCGTGGAGTGCGATGGTCTCCATGATTTATTCATCATTGAAGGTCATGACATAGATGAAAATCATGATAGACTGCTGCCTGATTTACGTCAACTTTACTTGCGCAATCTTGGTAGCCTTGAGAGAATAGTAGGCGACAACCGTCTTTGGAGAATGTTGAATTTCAAAATGTTGAATCAGCTAACAGTGTGTGGTTGTGACAAACTGAAATATCTTCTTCCTCTTTACATCCTCAAGAATCTTGAGCAACTCCAAAATATTGATATAAGTAACTGTGAGTTGCTGGTACGAGTTTTTGGAAATGACGAAGATACAGTAATTACCGATCAGCCAAATAAAATGGCGTTATCCCTCTTGCGTTTTCTTAGGCTCAGCAATTTGCCAAGGCTCGTCAGTATTTGTTCAGGAGCTAGTCATATTATCCCTCTTCACCTGAAACAAATGACCATTGAAGACTGTCCTAAGTTGACTTTTCCTTTTGAGCATTCCCTAAGACATACTGAGGAAGATCCCCCTGTGGAAAACTTTAGAGAGATGATCACAGTCCTTTCATGGGAGAATATGAATCTTCATAAGTTGAATTGCTTGAAAAATATGTGCATCGACTTCCCGGCTTCGTTTACGCATCTGATATCTCTCCAGTTGTACCAATGTGACAATTTGAAATATCTGTTTTCATCGTCGGTAACCCAGCGGCTTTCTTCCCTCCAAGAGCTTAAGATAATTTCGTGCGAAAGGGTTGAACAAATTATACTAGAAGAAACGAGAGAAACATCAACTCTAGATACTATTGAATTCTCTCAGGTGAACACTCTAATTCTTGAGAAATTACCTAAGTTTACTAGGTTCTGCGAGGATGGTTGTGTCGTTAAATGGCTCTCGTTGAAGATGGTAAGAGTGGTTGAGTGTCCTAAGATTCGGAAGTCTTCTTTGGGAACAGTAGACGGGCCTCTCTTGAAGTCAGTACAGGTGATTGATTGCAAGCCATGGGAAAATAAAGATCTTAATAGCAACATTATTCACCTCTTCAAGTTAACTGATGAACTTTCGGATCTTCCAGAATTAAAAATCGAAGGCTCTGAGCATATCAAGAAATATGTGGAACTGGAGCTTCAGGAATCATCTTTCACCCAACTGAAGATGCTAGAGGCCAGACAGTGCGATGAGGAGTTAAATAAATTTTTGTCCATTCTGCTCCGTAGGTCATATAAGGTTGAGCGGCTAACGGTAGAAAACTGCAAACAGCTGGAACAAGTTTTTGACCTTGGAGACTTTGTTGCTGACAAAAATGGACATGGGCTATTCCCCATTTTACACTCAATGAGATTGTTCGATCTACCGAAGTTGAATTGTATATGGAACAAGGATCCACGTGGGATTATTGAACTTGGTAAACTAGTTAAGTTAGAAATCATCAAGTGTGGCTTACGGAAGAGTATAGTTTCGACTGCCATACTTGAAAGTCTTGTGCAACTGGAGGAATTAAATATAGATTCGTGTGAGATGATAGAAGAAGTAGTGGAAGAGGAGACGGAAAAGCAAGAAAGATCATTTCCTAATTTAAAGGGTCTTAAACTTGTAAGACTCCCCAAGTTCATCAAGTTCAACTCGGGGAATTGCAATTTTAGATTTCCGAATATGCTGACTTTGACGATAGAGAACTGTCCCAACATGAATGTATTTACTACTGGAATTTTAAGCACGCAGACTACAACTATTGAAGGGACATCTGATCAAATGCTGGATGAGATTATGGATATGTGCCCGAAAGTGCAGAAATTGAAGCTGGTAGGCCTCGACACTTTTGATGAGATATGGCAGGGCTGCGTTTCTACTAAATCAGCCTGTGAGCTAAATGAGCTAGAAGTGGATGCCTTATGCAATCTGAAATATATTTTTCCCTCGAGTATGGTGCCACGGTTGAAGAAGTTAACGAAACTCATTGTGAGTAATTGCAATTCACTGAGTATTGTGTTTCAACGTACGGAGGAAAAGGATTTGAAGCTTCCTGTGCTAGGAGAACCGATACCTAGTTGCCCTCCTGCATTGAAACAGGTACTTCAAAACCTGGAGATTGTACGAGTAAAAAGTTGTGATTCTCTTCAACACCTGTCATTAGGCTCCAGCTGTGTCAGGCTGAAAGAAATAGAGATTTCTAATTGTAAAATTTTGGAAGAAATTTTCATCGACACAGAAGAAGAAAAAACGAATGAGAGAATTTTCTATCAGTTGAAATCTATCATTCTTGAAAATTTACCAAAGCTTTCAAGCTTCACTGCGGAGACATTTAAATTTCCATCACTCATGAAAGTGAAGATAGTGGACTGCCCTGCACTCGAGACATTTTCAAGGAACGTTTCCGCTACAGCAGACAACTACTTCTCAAACATGGTAAATGTGTCTACTGCATATTTCCTTGTGGATTCTTTTGAAGAACTGGAGGAAATGCATCTTATAAATGTGGGTGGTCGTCAAAATATATGGAACAGCGATCCGTCTTCAAGTTCACAACGTAAACTGAAGATTGTACCATCCAACACGCTGATAATGATGCAGAAGCTTAAGAAATTTACAGTGCAGAATTTCAATGCATTAGAAGTGTTGTTTGACATAGATGAGGATTCCCTTTCAGGCGAAGGTGAAATGAAATTACTGCCTCAGTTAGAGGTACTGGAGTTGAGTGATCTACCTGACATGCAACTGTGGAAACAGGAGCCTAAAAATCCAGTGTTAAAAAATTTGACATCCCTTGAAATCATCAGTTGCAGAAGCATCAAAAAATTGTTCTCCATTTCAGTGGCTAAACACCTTTCCGTTCTGAAACTGCTAAAATTATATGAATGTGAAAATATGGTACAAGTTCTTCAAGGTGGAGAAGAAAACAGTAGAAAAGGAAACAGCGAAAAAGTATTTCAGAAGTTGGAGCACCTTATACTTAAACATCTGCCAAATCTCACCAGTTTCTGTGAAGAAAACTTAGAATTTGAATTCTCCGAGTTACAGATGGTTCGAGTGGAGGACATTCCAAAGATGAAAACATTTGTTATGGGTTCTCTGAAGACACCAAAATTAAAGGAAGTCTATGCCACTTATATTGCAAAATGCTGGCAAGGAGATCTGAACAAGACTATAACATACTTGTGCGAAAATCAGGGCAAACTTAAACGCATGAATGATTTTGGAAGATTGAGGAATTGTACTGCAAGTTGGCCACAGATTCCAACTGTTGGAGTGACATCTGATCATATACTGGATGAGATTATGGCGTTTGGGCAAGGTGATGAGGAATTGGACCCGATTTCATGA 6150 0.4046 MELLSGMVLKILPWRCVSFLIGADPRLLSKLDDQIRRLSSMHVALRERIDIATTNEGDVADEVYIWLVEATHLVEEGEKFLKLCIGGTLPRSEISAEAENIMMKIDFLLENGKFDGNIYRQPVIFDSEQNILEGLESRMSICRRIIEELRDRDVGLIGVHGMGGVGKTTLVKEVVRYAVEEGLFDVTVWPEVPAEASYVRRIQDEIAEGLGLGLDHEESEAMRADIISQVLTRSERKVLIILDDVWQRLDLWKIGIREEYGFYALVPFKVLLTSRSIKALRSISHEMKILSVPTLTAEEAFCLFQKHVEQAKSAEFSALAQGIAKCCGGLPLTIFEVAGQLSGCSLSGWQDALQILSSSVINSVLGKRTFSCLNRSYDHLRNKEEEFIFLLCSVLGEQIDCEDLLKYALGLGLFQAQGLDTVSAVKDKLYHLINSLRESCFLEDGKNSQYVTMNDLVRDFALHAVSRVDGDCFIVRKHSWQTLPWEEMAKFGYISLQISNIMHELPQRLLFPNPKLLHIYDENRSSKIPDDFFIGTEAGLRVLALIKMQLLSLPSSLLVLTNMDTLCLDYCELGDISMIGELQTLRVLSLSHTNIEQLPKQIGQLTRLCLLDLSNCSNLNVIPPDVLSSLTQLEDLRMENSFNNWVVGEDNDKSNASLVELTRLKFLSALNIHIPDTKIIPEAFSWDHLDRYEITIGQDFPCSREREAFKVLKLNYKKGNIEGSEHWIKLLLKSSEQVWLKEFKGFENFLLDLNKGRWESLKHLHIQDDDELEYLTPKVVTEILESLVLKKLSNLRGIKHREFFDDPLGNLTVVKIECCPRLEFVFDVKRFARLIHVRELEVTGCKKMVAIAQMSGMQLINGKPFFDGVPWEFEFPHLHALTLQDLDNLSGFWRFQQFDDREIISTNSLAGLPRLRHLKLIRICRIRHLVLSTTEDRVLPLQNLKTMEIVECDGLHDLFIIEGHDIDENHDRLLPDLRQLYLRNLGSLERIVGDNRLWRMLNFKMLNQLTVCGCDKLKYLLPLYILKNLEQLQNIDISNCELLVRVFGNDEDTVITDQPNKMALSLLRFLRLSNLPRLVSICSGASHIIPLHLKQMTIEDCPKLTFPFEHSLRHTEEDPPVENFREMITVLSWENMNLHKLNCLKNMCIDFPASFTHLISLQLYQCDNLKYLFSSSVTQRLSSLQELKIISCERVEQIILEETRETSTLDTIEFSQVNTLILEKLPKFTRFCEDGCVVKWLSLKMVRVVECPKIRKSSLGTVDGPLLKSVQVIDCKPWENKDLNSNIIHLFKLTDELSDLPELKIEGSEHIKKYVELELQESSFTQLKMLEARQCDEELNKFLSILLRRSYKVERLTVENCKQLEQVFDLGDFVADKNGHGLFPILHSMRLFDLPKLNCIWNKDPRGIIELGKLVKLEIIKCGLRKSIVSTAILESLVQLEELNIDSCEMIEEVVEEETEKQERSFPNLKGLKLVRLPKFIKFNSGNCNFRFPNMLTLTIENCPNMNVFTTGILSTQTTTIEGTSDQMLDEIMDMCPKVQKLKLVGLDTFDEIWQGCVSTKSACELNELEVDALCNLKYIFPSSMVPRLKKLTKLIVSNCNSLSIVFQRTEEKDLKLPVLGEPIPSCPPALKQVLQNLEIVRVKSCDSLQHLSLGSSCVRLKEIEISNCKILEEIFIDTEEEKTNERIFYQLKSIILENLPKLSSFTAETFKFPSLMKVKIVDCPALETFSRNVSATADNYFSNMVNVSTAYFLVDSFEELEEMHLINVGGRQNIWNSDPSSSSQRKLKIVPSNTLIMMQKLKKFTVQNFNALEVLFDIDEDSLSGEGEMKLLPQLEVLELSDLPDMQLWKQEPKNPVLKNLTSLEIISCRSIKKLFSISVAKHLSVLKLLKLYECENMVQVLQGGEENSRKGNSEKVFQKLEHLILKHLPNLTSFCEENLEFEFSELQMVRVEDIPKMKTFVMGSLKTPKLKEVYATYIAKCWQGDLNKTITYLCENQGKLKRMNDFGRLRNCTASWPQIPTVGVTSDHILDEIMAFGQGDEELDPIS 2049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0159 2049 Pfam NB-ARC domain 143 377 IPR002182 GO:0043531
Dere11g0159 2049 Coils Coil 132 152 - -
Dere11g0159 2049 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1303 1510 - -
Dere11g0159 2049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 391 IPR027417 -
Dere11g0159 2049 SUPERFAMILY RNI-like 1626 1937 - -
Dere11g0159 2049 Coils Coil 28 48 - -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 831 1117 IPR032675 -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 1532 1747 IPR032675 -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 1755 1982 IPR032675 -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 1118 1264 IPR032675 -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 1282 1531 IPR032675 -
Dere11g0159 2049 SUPERFAMILY RNI-like 1382 1677 - -
Dere11g0159 2049 PRINTS Disease resistance protein signature 232 246 - -
Dere11g0159 2049 PRINTS Disease resistance protein signature 327 341 - -
Dere11g0159 2049 PRINTS Disease resistance protein signature 603 619 - -
Dere11g0159 2049 PRINTS Disease resistance protein signature 156 171 - -
Dere11g0159 2049 SUPERFAMILY RNI-like 784 1105 - -
Dere11g0159 2049 SUPERFAMILY RNI-like 1132 1368 - -
Dere11g0159 2049 Gene3D Ribonuclease Inhibitor 455 667 IPR032675 -
Dere11g0159 2049 Gene3D - 124 292 IPR027417 -
Dere11g0159 2049 Gene3D - 294 383 IPR042197 -
Dere11g0159 2049 SUPERFAMILY L domain-like 443 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0159 Dere-ChrDere11 2705408 2718056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0159 153 436 WRKY Transcription Factor Family AT5G45050 23.355 2.95e-07 53.9