Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere11g0155 | ATGGATAGTGCACCCTACCTTCGAAAAGTGGACTTGAAAAAGTACAAAAGCTACCAGCAATTATCTGATGCTCTGGCCAAAATGTTCAGCTCTTTCACCATGGGTAACAATGGGGCGCAAGGAACGATAGACTTCATGAATGAAAGCAAGTTGATGGATCTCTTGAACAGCTCTGAGTATGTGCCAACCTGTGAAGATAAAGATGGCGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGCTGAATCATGCCAGCGACTGCGAATAATAAAAGGATCAGAAGCCATTGGGCTTGGTATGTAA | 309 | 0.4498 | MDSAPYLRKVDLKKYKSYQQLSDALAKMFSSFTMGNNGAQGTIDFMNESKLMDLLNSSEYVPTCEDKDGDWMLVGDVPWEMFAESCQRLRIIKGSEAIGLGM | 102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere11g0155 | 102 | Gene3D | - | 1 | 102 | - | - | |
| Dere11g0155 | 102 | SUPERFAMILY | CAD & PB1 domains | 1 | 91 | - | - | |
| Dere11g0155 | 102 | ProSiteProfiles | PB1 domain profile. | 1 | 99 | IPR000270 | GO:0005515 | |
| Dere11g0155 | 102 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 1 | 99 | IPR003311 | GO:0005634|GO:0006355 | |
| Dere11g0155 | 102 | FunFam | Auxin-responsive protein | 1 | 102 | - | - | |
| Dere11g0155 | 102 | Pfam | AUX/IAA family | 1 | 101 | IPR033389 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere11g0155 | Dere-ChrDere11 | 2634049 | 2634357 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere11g0155 | 8 | 96 | B3 DNA Binding Superfamily | AT5G20730 | 28.090 | 8.49e-07 | 43.9 |
Transcription factors information