Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0138 ATGTCAGAGTTGACGTACGGGACATCATTTGTGACTGCTGAGATTGATGGGTCTTTGACGAGAGAAGCTATGGATTTGAGTGGACAAGTAAAGCTAGTGATTTTCGTATGCACAAGGAAGGACCCCTACAATGCCTTACTTTTTCTCTTGATTACCTCTGACCTTTGGAACCCCAAGACAAATGGAGGGCCTAATTTCAATCTTGCTCACTCTGTCACTGGCCAACTGATTAAGCTGCCACTGGCCCTCTTCCTTCCTTCCTGGTATTTTATCAAACACATGGAGTGCAGTGTTCCTCCTACTAGTAACCCTACCTCATCCGAAGCGTCATCTTCAAAGGCGAAGAAAAAGAACCCGAAGAAAAGCAAGGGAGGAGTGAAACTTTCCACTGACCCACAGAGCGTCGCGGCGAGAGAACGAAGGCATCGAATCAGCGATAGGTTCAAGATCTTACAGAGCATGGTTCCTGGTGGGAGTAAGATGGACACAGTGTCGATGCTAGAGGAAGCGATTCATTACGTGAAGTTTCTAAAAACCCAGATTTGGCTTCACCAAACCATGATCAACTCTGTGGACGATGATAATCTTTCCTTTCCCACTCATGAACAGTTCGCTTTGCTTCAGCAAAATCCTTCTTCTTCGGCGGATTCAGTGCAGAATTTGACGCAGATACCGCTAGACCAATATTGCTGCTTCCAAGGTGAATTTGCAACAACAACATTTCACGACGACATGAAATATTGGCCAGCTTAG 753 0.4568 MSELTYGTSFVTAEIDGSLTREAMDLSGQVKLVIFVCTRKDPYNALLFLLITSDLWNPKTNGGPNFNLAHSVTGQLIKLPLALFLPSWYFIKHMECSVPPTSNPTSSEASSSKAKKKNPKKSKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHQTMINSVDDDNLSFPTHEQFALLQQNPSSSADSVQNLTQIPLDQYCCFQGEFATTTFHDDMKYWPA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0138 250 Gene3D - 133 186 IPR036638 GO:0046983
Dere11g0138 250 MobiDBLite consensus disorder prediction 100 140 - -
Dere11g0138 250 CDD bHLH_AtIND_like 129 188 - -
Dere11g0138 250 FunFam Transcription factor LAX PANICLE 131 194 - -
Dere11g0138 250 Pfam Helix-loop-helix DNA-binding domain 138 177 IPR011598 GO:0046983
Dere11g0138 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 187 IPR036638 GO:0046983
Dere11g0138 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Dere11g0138 250 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 104 241 IPR045843 GO:0003700|GO:0006355
Dere11g0138 250 SMART finulus 134 183 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0138 Dere-ChrDere11 2140632 2144547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0138 113 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 52.326 2.40e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere11g0138 HLH 1.1e-07 No_clan