Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0129 ATGGCTGCATCATCGTCACCACTTGGTTTCCTCCTCCTCCTCCTCTTTCTTTCCCTCTCAGTTGCAGCCATGGCTCAACAAGAAGCTCATTTTGTCTACCATGGATTCAAAAATATTAATGAAACTGAGCTTACCCTTGAGGGAGCTAACATTATCAAATCCAGCGGTTTGCTTAGGCTTACCAACACATCAAGCAACATAGTAGGCCATGCTTTCTATTCTTTACCCTTTCAAATGCTTTATAACTCAACCCAACAACAGAAAGCTTCATCGTTCAGCACATCCTTCGTTTTCTCTATTGTCCCTTCAGCCTCTGGCCCTGGTGGCTTTGGCCTTGCTTTTACCATAGCACCCAAAACCAAATTTCCAGAGGCTGAAGCTGGGCACTTTCTTGGTCTATATAATGGAGACAATGATGAGGATCCTTCAAATCAAATATTTGCAGTCGAATTCGACACGGTAAATGGCTCCGACAAAGGTGAATCTGACTCCGAAGGGGACCATGTTGGGGTCAATCTCAATGGCCTGAGATCAAGCGTCTATGAATCAGCTGCTTACAATATTGAAGAAGGCCCACATGTTAAAAAGGTGGAATATTTCAGTTTCGAGAAATCTAATGCTGTACAAGCTTGGTTAGATTATGATGGTGATAAGCAAACTGCGAATGTAACCATAGCTCCCATATCAGTGCCTAAACCCTCCCGACCACTAATACTTAATCATATCATTAACCTTACTGGTGTTCTGAAGGAAACCATGTATGTTGGTTTCTCAGCATCAACAGGGGAAACTAAAGCGAGCTCTCATTACATTCTGGGGTGGAGCTTTGCACTCAACAGACCTGCTCCTTCGCTTGACATTTCCAAGCTTCCACATCCACCACCTAAAGAAACAGACCCTTCCTCTTTTCGTTGGGTCAATTTAGCCATAGGATCTTTGTCTGCTTTAACCTTAATCTTGTTGGTTTCCTTATGTTCTCTAACGCTGTACAAGAGGTACACCAATTTTGAAGCTCTGGAGGATTGGGAGCTAGATTGCCCTCACAGATTCAGATACAGAGATCTTCACACGGCAACAAAAGGGTTCAAAGAGAGTGAGCTAATTGGAGTTGGAGGCTTCGGTGCTGTTTACAAAGGTGTCTTGCCCTCCACAGGGACTGAGATCGCTGTGAAGAGGATTGTTCGTAGCCCAACCGAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTAAGACACAAGAATTTGGTCAACCTTCAAGGATGGTGTAAGCAGAAAAATAATCTCCTTCTAATCTATGATTATATCCCTAATGGAAGCCTAGATTCACTTCTCTTCAATGAAAACCTGGTTTTGAATTGGGACCAAAGGTTCAATATCATCAAAGGCATAGCTAATGGGCTACTATACCTCCATGAAGAGTGGGAGCAAGTGGTGGTCCATAGAGACATAAAAACCAGCAATATTCTCATAGACGTAGATTTAAATGCTCGTTTAGGTGACTTTGGTCTAGCAAGGCTGTATGATCATGGTGACGTGTCACGAACAACTAAGGTGGTTGGGACAATTGGGTATATAGCACCAGAATTGACTCTCACAGGAAGGGCTTCTACAAGCTCTGATGTGTATTCTTATGGGGTTTTGCTCCTTGAAGTAACTAGTGGGAGAAGACCCATAGGCGAAGGAAAATTCTTTTTGATGAACTGGGTTGTGGAGAAGCACCACCTGGGTCAGATTCTTGAAGTGATTGATCCGAAGTTGAACTCAGTCTATGTAGAGGAAGAGGTGGAAATGGTTCTGAAACTGGGTCTTCTCTGTACTCAACATGATGCAGATTCAAGACCCACCATGAGACAAGTGATGAGGTACCTAAACTTTGATGACCCTCTTCCTGGTATTGCTGGTATCCGGCGCAATGCTCAGAGCAGCAGATTGAACTTCGATTTCTTAGGAATTGTGACTACTAGTACAATCTCAACATCTTATAATTCATCCTCCATTGATGGCAGGAATAGCATGTCTATTGAAGATGGTAGACAGCATATATAG 2058 0.431 MAASSSPLGFLLLLLFLSLSVAAMAQQEAHFVYHGFKNINETELTLEGANIIKSSGLLRLTNTSSNIVGHAFYSLPFQMLYNSTQQQKASSFSTSFVFSIVPSASGPGGFGLAFTIAPKTKFPEAEAGHFLGLYNGDNDEDPSNQIFAVEFDTVNGSDKGESDSEGDHVGVNLNGLRSSVYESAAYNIEEGPHVKKVEYFSFEKSNAVQAWLDYDGDKQTANVTIAPISVPKPSRPLILNHIINLTGVLKETMYVGFSASTGETKASSHYILGWSFALNRPAPSLDISKLPHPPPKETDPSSFRWVNLAIGSLSALTLILLVSLCSLTLYKRYTNFEALEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGAVYKGVLPSTGTEIAVKRIVRSPTEGMREFAAEIESLGRLRHKNLVNLQGWCKQKNNLLLIYDYIPNGSLDSLLFNENLVLNWDQRFNIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDVDLNARLGDFGLARLYDHGDVSRTTKVVGTIGYIAPELTLTGRASTSSDVYSYGVLLLEVTSGRRPIGEGKFFLMNWVVEKHHLGQILEVIDPKLNSVYVEEEVEMVLKLGLLCTQHDADSRPTMRQVMRYLNFDDPLPGIAGIRRNAQSSRLNFDFLGIVTTSTISTSYNSSSIDGRNSMSIEDGRQHI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0129 685 CDD STKc_IRAK 368 628 - -
Dere11g0129 685 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Dere11g0129 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 295 IPR013320 -
Dere11g0129 685 SUPERFAMILY Protein kinase-like (PK-like) 346 630 IPR011009 -
Dere11g0129 685 FunFam Lectin-domain containing receptor kinase VI.3 347 438 - -
Dere11g0129 685 ProSiteProfiles Protein kinase domain profile. 362 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0129 685 Gene3D - 25 280 - -
Dere11g0129 685 CDD lectin_legume_LecRK_Arcelin_ConA 30 279 IPR001220 GO:0030246
Dere11g0129 685 Pfam Legume lectin domain 29 291 IPR001220 GO:0030246
Dere11g0129 685 Gene3D Transferase(Phosphotransferase) domain 1 439 631 - -
Dere11g0129 685 MobiDBLite consensus disorder prediction 666 685 - -
Dere11g0129 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Dere11g0129 685 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Dere11g0129 685 PANTHER - 22 629 - -
Dere11g0129 685 Pfam Protein kinase domain 362 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0129 685 SMART serkin_6 362 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0129 685 FunFam L-type lectin-domain containing receptor kinase V.9 28 281 - -
Dere11g0129 685 FunFam L-type lectin-domain containing receptor kinase S.4 439 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0129 Dere-ChrDere11 2059095 2061434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0129 11 636 Receptor kinase-like Gene Family AT3G08870 51.956 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0129 Pkinase 7.2e-50 CL0016