Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0128 ATGGCTGCATTATCATCAACACTTGGTTTAATCCTCCACCTCTTTCTTTCTCTCCTCGTTGCAGCCAAGGCTCAACAAGCGACCCAGTTTTTCTTTCAGGGATTCAATAATAGTGAAAGTGATCTAGTCTTTGATGGAGCCACCATTGTCAAACCTGGTGGTTCGCTTAAGCTCACAAACAGATCATACAATATTGTAGGCCATGCTTTCTATTCCAAATCCTTTCTAATGGTTAATACAACCAAACAACAAGTTTGTTCCTTTAGCACATCCTTCGTTTTCTCTATTGTCCCCTCAACCTCTGGCCCTGGTGGCTTTGGCCTTGCATTCACCATAGCACCCTCAACCCAATTTGCACAAGCTGGTTCTGGCCATTTTCTTGGACTTGTTAACTCCTCCAATGATGGGAATTCTTCAAATCATATTTTTGCAGTCGAATTTGATACGGTAAATGGCTACGGAGGTGAGTCTGACAGTGAAGGGAACCATGTTGGTGTCAATATCAATGGCATGAACTCAAATGTCACTGAGCCAGCTGCTTACTTTAAAGAAGGCACAGAAGCTCAAAAGGAAGAGTTCAGTATGGAGAAATCTAAATCTGTGCAAGCTTGGATAGAATATGATGGTGAAAAGAAATTTGTGAATGTGACTATAGCTCCTTTGTCAGTGCCTAAACCCTCCAAACCACTCATATCTGATCACATTGACCTTAACGATGTTCTAAATGAAACCATGTTTGTTGGTTTCTCAGCATCAACAGGGAAAAGTAAAGCAAGCTCCCATTACATTCTAGGATGGAGCTTTTCAATGAATGGACCTTCCGCATCACTAAACATTTCCCAGCTTCCAGAGCCACCTTCAAAGGAGAATGATCTAAATTCAACCTCATTCCCTTGGGTCAACTTTGCCATAGGAGTTTTGTCCGCTTCAACCGTAATCTTGTTCATTTCTTTGTGTTCTGTAACATTTTACAAGAAGTACTCGAATTTTGAGACTCTTGAAAAGTGGGAACTAGACTGTCCTCACAGATTCAGATACAGAGATCTTCACTCAGCAACAAAAGGGTTCAAAGAGAGTCAGCTAATAGGAGTTGGAGGCTTTGGTGCTGTCTACAGAGGCGTCTTGCCTTCCACTGGAACTGAGGTTGCAGTGAAGAGGATTGTGCGAGGCCCAATCCGAGGAATGAAGGAATTTGCAGCCGAGATTGAATGCTTAGGAAGATTGAGACATAAAAACTTGGTCAATCTTCAAGGCTGGTCACCAGAATTGACTCGCACAGGAAAGCCAACCACAAGCTCTGATGTGTATGCTTATGGGGTTTTGCTCCTTGAAGTGACTAGTGGGAGGAGACCTATTGGGTCAGGACAATTTTTTTTGGTGGATTGGGTTGCAGAGAATCACAGTCTGGGTCAGATTCTTGAAGTGGTTGACCCTAAGCTGAACGCTGTTTATGTTGAGGAAGAAGTGGAATTGGTTCTGAAACTGGGTCTCCTCTGTTCTCAACATAATGCAGATTCAAGACCCACCATGAGACAAGTGATGAGGTACCTAAACTTTGATGACCCTCTTCCCGAAATTGATGATTGCAGGAGACAGAGTGATTTTGGGAGTAGCAATATGAGCTTTGGTTTCTTAGAAATGGTGTCTAAAAGTACTATCTCAACTTCAAATTACTTATCCCCCATGAATAGCATGAATAGTAGGCTTATGGAAGATGGTAGATAG 1725 0.4243 MAALSSTLGLILHLFLSLLVAAKAQQATQFFFQGFNNSESDLVFDGATIVKPGGSLKLTNRSYNIVGHAFYSKSFLMVNTTKQQVCSFSTSFVFSIVPSTSGPGGFGLAFTIAPSTQFAQAGSGHFLGLVNSSNDGNSSNHIFAVEFDTVNGYGGESDSEGNHVGVNINGMNSNVTEPAAYFKEGTEAQKEEFSMEKSKSVQAWIEYDGEKKFVNVTIAPLSVPKPSKPLISDHIDLNDVLNETMFVGFSASTGKSKASSHYILGWSFSMNGPSASLNISQLPEPPSKENDLNSTSFPWVNFAIGVLSASTVILFISLCSVTFYKKYSNFETLEKWELDCPHRFRYRDLHSATKGFKESQLIGVGGFGAVYRGVLPSTGTEVAVKRIVRGPIRGMKEFAAEIECLGRLRHKNLVNLQGWSPELTRTGKPTTSSDVYAYGVLLLEVTSGRRPIGSGQFFLVDWVAENHSLGQILEVVDPKLNAVYVEEEVELVLKLGLLCSQHNADSRPTMRQVMRYLNFDDPLPEIDDCRRQSDFGSSNMSFGFLEMVSKSTISTSNYLSPMNSMNSRLMEDGR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0128 574 Pfam Protein kinase domain 356 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0128 574 SUPERFAMILY Protein kinase-like (PK-like) 339 525 IPR011009 -
Dere11g0128 574 Gene3D Transferase(Phosphotransferase) domain 1 423 525 - -
Dere11g0128 574 ProSiteProfiles Protein kinase domain profile. 356 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g0128 574 CDD lectin_legume_LecRK_Arcelin_ConA 28 272 IPR001220 GO:0030246
Dere11g0128 574 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Dere11g0128 574 Gene3D Phosphorylase Kinase; domain 1 341 422 - -
Dere11g0128 574 Pfam Legume lectin domain 28 283 IPR001220 GO:0030246
Dere11g0128 574 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 287 IPR013320 -
Dere11g0128 574 PANTHER - 41 420 - -
Dere11g0128 574 Gene3D - 25 277 - -
Dere11g0128 574 FunFam L-type lectin-domain containing receptor kinase V.9 26 276 - -
Dere11g0128 574 Pfam Protein tyrosine and serine/threonine kinase 420 516 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0128 Dere-ChrDere11 2054419 2056544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0128 420 528 Receptor kinase-like Gene Family AT3G08870 49.541 1.84e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere11g0128 Lectin_legB 3.5e-75 CL0004