Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0124 ATGATGCATCCTCATATTCTTCTTCACTCCTCTTCCTGTTCAGTCCACGATGACATAACCTCAGCTTTTGACCAATTCGACGCTTCCTCCATCTTCTCTGAAGATAATTTCCAATACCCACTTGACATGGGATCAGAAGTATCCAAATCCATAGAGCAATCCTGCATCAATGAATTCGGTGTTTCCTCCATCTTCTTATCTGAAGATCATTTCCAATACCCACTTGACATGGGATCAGAAGTATCCAAATCCATAGAGCAATCCTGCATCAATGAATTCGGTGTTTCCTCCATCTTCTTATCTGAAGATCATTTCCAATACCCACTTGAAATGGGATCACAAGTGTCCAAATCCATGGAGCAATCCTCCATCAATGAGTGTGAAGTTTCCTCCATCTTCTTCTGTGGGGATAGTCTCCATTACCCAGTTAATGAAGAAGATAATCTAGAACTTCCATCACTGACTGAGGATATCTCTATGGATTTGGATGCTTTTGACCCCATTTTGGGTACCCAGATTCATGCATACCCTGAACAAAGTGAAGAAAGCTTTATTCTTTCGCAGAATCCCTCTTCTGAAGCAGAAGAAGGAGCTTGGAGTCCCAGCCCATCCCTGAAATCATCAGAATTTTCCACAGTTCAACCGCCACCATTGAGCTTGCCACAAGAAGACATGGAAATTGAAACCCAATTCATTCTTCCACATCTTCTAGAAGCACACGGTGAAGCAAGAGATCAGAACCAGAATGCCCTAGCAGAAGAAATACTGAGATGCATAAGCCAGAAAGCCAGCCCACTTGGAGAAGATCCTGTGGAACGTCTAGTATTCCACTATTCCTCCCAAAACGTCATAAATAATGTCACAGAAAACCCTCAGTGGCATTTACTCAAACAGGAGGCGTGCAAGAATTTTGACCCTGCATTTAAGGCATTCTACCAAATCACCCCACATGGAAAATTTGCACATTTTACAGCCAATTCAGCAATTCTAGAAGCCATACCAGAGGATTCAGAGGTTATACACATAATAGACTTTGACATGGGAGAAGGGCTTCAATGGCCTCCGATGATAGAGGCCATTTCTCAACAGAACAGAACATTGAAATTAACATCAATCAAATGGGGAACAGAGGAAGAAAACTCTGAGAAACACAGAAGGAACTTCATTGAACATGCAAGATCCTGTGGTCTAAAGTTGAAAATAGAAGAAAAGAGTTTTGAGGATTTGATTACAGAACTCAAGAAACTGAACATAAGGGGTGGGAATATGAAAAGAGATTTTCTGGTCTTTAACTGCATGGTGGGTCTTCCTCATATGGGGAGAGGAAGAAGCCGAAGATCGGTCATGGAGTTTATAAATTTAGCCGAGAGCATGATAAGCAAAAACACCTGCAACAGGGGAATTATCACTTTTGGGGATGGAGAAGCCACTGAGAAACTGAGAAGCAGCTTGAATTTCAGGTCATTCTTTGATGGGAATTTGATGCATTACAAGGCCTTATTGGAATCAATTGAATCAAATTTTACAGGATGTTTCTCACAAGCAAGAATTGCCATGGAGTTCCTATTTGTGGGACCCTATGTCTCTTCTCTTGCTTGGATGAAGAACTGGGAAGAACTGAGAGAAAATTGCCATTTTCAATCAGAGATTGGACTTGGGTTAGAGGGTAGAAGATTAAGCAAAGGGATTTTAATGGAAGTGAGAGAAATGTTGAGAGGAAGCAGGGAAGGTTCACATGAGGCAAGGATCGAAGGACAGAATGGGAATCAAATGGTTCTAGGATGGAATGGAACGCAGCTGGTTAGAGTTTCCGTTTGGGGAAATTAA 1827 0.4171 MMHPHILLHSSSCSVHDDITSAFDQFDASSIFSEDNFQYPLDMGSEVSKSIEQSCINEFGVSSIFLSEDHFQYPLDMGSEVSKSIEQSCINEFGVSSIFLSEDHFQYPLEMGSQVSKSMEQSSINECEVSSIFFCGDSLHYPVNEEDNLELPSLTEDISMDLDAFDPILGTQIHAYPEQSEESFILSQNPSSEAEEGAWSPSPSLKSSEFSTVQPPPLSLPQEDMEIETQFILPHLLEAHGEARDQNQNALAEEILRCISQKASPLGEDPVERLVFHYSSQNVINNVTENPQWHLLKQEACKNFDPAFKAFYQITPHGKFAHFTANSAILEAIPEDSEVIHIIDFDMGEGLQWPPMIEAISQQNRTLKLTSIKWGTEEENSEKHRRNFIEHARSCGLKLKIEEKSFEDLITELKKLNIRGGNMKRDFLVFNCMVGLPHMGRGRSRRSVMEFINLAESMISKNTCNRGIITFGDGEATEKLRSSLNFRSFFDGNLMHYKALLESIESNFTGCFSQARIAMEFLFVGPYVSSLAWMKNWEELRENCHFQSEIGLGLEGRRLSKGILMEVREMLRGSREGSHEARIEGQNGNQMVLGWNGTQLVRVSVWGN 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0124 608 MobiDBLite consensus disorder prediction 180 217 - -
Dere11g0124 608 Pfam GRAS domain family 235 606 IPR005202 -
Dere11g0124 608 Coils Coil 399 419 - -
Dere11g0124 608 ProSiteProfiles GRAS family profile. 224 607 IPR005202 -
Dere11g0124 608 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 600 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0124 Dere-ChrDere11 1897300 1899126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0124 234 606 GRAS Transcription Factor Family AT5G66770 25.441 1.52e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere11g0124 GRAS 1.3e-42 CL0063