Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0117 ATGGCCACCAATGCCACTCAGAAATTCCACGATGATGGTGCCGGTGAATTCTACTCAGAAATTTCAGTCTCCCCGGCGGCGACCCACGACGGCTTAGAGTTCTGGCAATACATGGTGGCGGGGTCCATTGCAGGTTCAACCGATCACATGGCGATGTTCCCGGTGGACACGCTCAAGACCCGGATGCAAGCCATAACCGGGTCAGGCACAGGTGGGCCGAACGGAGTACGGCGAGCACTGGGTTCGATTCTGAAGCTCGAAGGACCTTCGGGACTCTATCGCGGTATAGCCGCCATGGGTCTCGGAGCGGGTCCTGCACATGCGGTGTACTTCTCGGTGTACGAGGTGTGCAAAGAGAATTTCTCCGGGGGAGATCCGAACAACTCCGCCGCACACGCGGCTTCCGGCATGTGCGCGACGGTCGCGAGCGACAGCTTGATGACGCCGATGGATGTGGTGAAACAGAGGTTGCAGCTGAAGAGCAGTCCGTACAAGGGAGTGTGGGATTGCGTGAAGAGGGTGTTGAGGGAAGAAGGGCTTGGTGCATTCTACGCGTCGTATCGGACCACGTTGGTCATGAATGCGCCGTTCACGGCTGTGCATTTTGCAGCGTATGAGGCGGCGAAGAGGGGGCTGATGGAAGTGTCATCGGGGAGCGCGGAGGATGAGAGGCTGGTGGTTCACGCCACCGCCGGAGCTGTCTCTGGGGCAGTAGCTGCGGCGGTGACCACCCCACTTGATGTAGTCAAAACTCAGCTACAATGCCAGGGAGTGTGTGGGTGTGACAAATTTTGCAGCAATTCAATTGGGAATGTGATTCAGAGTGTGATCAGGAAAGATGGATACAGAGGCCTCACCAGAGGATACATCCCCAGGATCCTCTTTCATGCTCCTGCTGCTGCTATTTGCTGGTCCACTTATGAAGCATCCAAATCTTTCTTTCACCATATCTAG 954 0.5618 MATNATQKFHDDGAGEFYSEISVSPAATHDGLEFWQYMVAGSIAGSTDHMAMFPVDTLKTRMQAITGSGTGGPNGVRRALGSILKLEGPSGLYRGIAAMGLGAGPAHAVYFSVYEVCKENFSGGDPNNSAAHAASGMCATVASDSLMTPMDVVKQRLQLKSSPYKGVWDCVKRVLREEGLGAFYASYRTTLVMNAPFTAVHFAAYEAAKRGLMEVSSGSAEDERLVVHATAGAVSGAVAAAVTTPLDVVKTQLQCQGVCGCDKFCSNSIGNVIQSVIRKDGYRGLTRGYIPRILFHAPAAAICWSTYEASKSFFHHI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0117 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 313 IPR018108 -
Dere11g0117 317 Pfam Mitochondrial carrier protein 32 122 IPR018108 -
Dere11g0117 317 Pfam Mitochondrial carrier protein 224 315 IPR018108 -
Dere11g0117 317 Pfam Mitochondrial carrier protein 128 214 IPR018108 -
Dere11g0117 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 211 IPR018108 -
Dere11g0117 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 120 IPR018108 -
Dere11g0117 317 PANTHER MITOFERRIN-1-RELATED 27 314 - -
Dere11g0117 317 SUPERFAMILY Mitochondrial carrier 30 308 IPR023395 -
Dere11g0117 317 Gene3D Mitochondrial carrier domain 4 217 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0117 Dere-ChrDere11 1796135 1797329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0117 1 315 Chloroplast and Mitochondria Gene Families AT1G07030 66.667 6.84e-150 422