Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0100 ATGGGGACAGGAAGGAAAATGCAAAATTTTTATGTCAGTGCGACTCAATCTATCTCTCCAAATTCTGTATGCGGCAGAAATTTGAAAAAGGATCAACTTGGTGGTGTAATATTTGGTTGCAAGAATGCTACCATAAAAGAATGTTTATCTAAGCAACTCTTTGGCTTACCAGCTCAACACTTCTCCTTTGTGAAGAATATTGATCCTGGGCTGCCTCTCTTTCTGTTCAACTATAGTGACAGGAAGCTTCATGGAATCTTTGAGGCGGCTAGCAAGGGGCAATGGTCTATAGACCCTTATGGATGGACTGACGGCTCAGAGAGAACACAGTATCCTGCACAGGTGCAAATTTGTGTACGGCTTCAGTGCCAGCCGCTGTCTGAAGATAAATTCAGACAAGTAATTGCAGACAACTACTACCTTAATAATCACTTCTGGTTTGAGCTAGACCATGGACAAACTAGAAAGCTTCTGTCTTTACTAGCATCTTTGGCAATAGGCCCGGGTACCCTTATACCACAGAATACAATGAAGTGGAGAATTGTATCTCGATCTCTTCCATCAAATGAAACTTCAGTGGAAAGTGAAGCATTTACAAAACTTGCATCAGAAATAGAACATGCTACTCACTCTAGTAAGAGATCTGATTCCTCTGAAATTGCTTCTTCTTTGGATGCTGATGGGGACACCCAGCAATTAGATTCTGACATGGTTGTGAAGGAACTAGAAGAAGATGAGAAATCCCTTGTATTCATGAAACTAAAAGAATTGGCTTTTAATCGTGAAAGTCAAGACCTTTCATTGTCAGAGTATGTGAAAGACACTCCTGATGTGAATTTTATGAACTTCGATGAGAAGGATTCTCCAGAGGCATCCACTGTTTTAGAAAAGAAGGAAGAGTTTCCTAGTCCTCCGTCTGAGTATCAGGACATCATAGCCCAGTTGACTCAAGAGGTCAAAGAACTGACAGCTTTCAAGACAACACAAACTCAGAAGTATTGTTATCTAGAGCAAAAGCTGGTGGAGGCAGAGTTGGAAATTCAATATCTAAAAGATCGCTGTACCACACTAGAATCTGCATGTAATATTTCTCTTGAACATGATGAACAGACAGTTATCCAGTCTTCTGATCAGCAGCATCTAGACCTTAAAGAGTCATTATTTCTAATAGGAGGCTATGATGGAGAATCATTTTTAGCAGCTACAGATTTGTATTGTCCTTCCCTAAATGTGATGAAATCTCTAAGGCCTATGAGCTCAGTTCGCTCATATGCTTCTGTTGTGCCATTGAATGGTGAGCTTTTTGTGTTTGGTGGTGGAAATGGTAGTGTTTGGTATGACACAGTTGAGTCTTACAATCCAATTTGTGACAAGTGGACATTGTGCCCATCTCTGAATCAGAAGAAAGGAAGCTTAGCTGGAGCTGCTTTAAGCAACAAAATTTTTGCCATTGGAGGAGGCAATGGAATTGATTGTTATTCAAAAGTTGAGATGCTTGATTTAGACATAGGACGATGGATCTATAGTCGATCAATGCTAGACAAGAGGTTTGCTCTTGCTGCTGTTGAATCCAATGGAATCATTTATGCTACTGGTGGATTTGATGGGAATGACTATCTGCAGTCTGCTGAAAGATTTGACCCCAGGGAACATTCTTGGACCAAAATAGCAAACATGAATACAAAGCGGGGCTGCCACTCATTGGTTGTCCTCAATGAAAAGTTGTATGCTCTTGGTGGCTTTGATGGTGACACGATGGTTTCAAGTGTTGAAGCTTTTGATCCCCGTCTTGGGACATGGATGATAGGGGAACCCATGAATCATCCTAGGGGATATTCTGCTGCTGCAGTGGTCAATGATTCAATTTATGTGATTGGGGGAGTTAAAGTTGGTGAAAACATTATAGATACGGTTGAGAATTATAAGGAAGGTCAGGGATGGCAAGAAATTTGCACAACAGCGGTTGGCAAAAGGTGTTTCTTGTCAGCTGTTGCCTTGTAG 2001 0.4103 MGTGRKMQNFYVSATQSISPNSVCGRNLKKDQLGGVIFGCKNATIKECLSKQLFGLPAQHFSFVKNIDPGLPLFLFNYSDRKLHGIFEAASKGQWSIDPYGWTDGSERTQYPAQVQICVRLQCQPLSEDKFRQVIADNYYLNNHFWFELDHGQTRKLLSLLASLAIGPGTLIPQNTMKWRIVSRSLPSNETSVESEAFTKLASEIEHATHSSKRSDSSEIASSLDADGDTQQLDSDMVVKELEEDEKSLVFMKLKELAFNRESQDLSLSEYVKDTPDVNFMNFDEKDSPEASTVLEKKEEFPSPPSEYQDIIAQLTQEVKELTAFKTTQTQKYCYLEQKLVEAELEIQYLKDRCTTLESACNISLEHDEQTVIQSSDQQHLDLKESLFLIGGYDGESFLAATDLYCPSLNVMKSLRPMSSVRSYASVVPLNGELFVFGGGNGSVWYDTVESYNPICDKWTLCPSLNQKKGSLAGAALSNKIFAIGGGNGIDCYSKVEMLDLDIGRWIYSRSMLDKRFALAAVESNGIIYATGGFDGNDYLQSAERFDPREHSWTKIANMNTKRGCHSLVVLNEKLYALGGFDGDTMVSSVEAFDPRLGTWMIGEPMNHPRGYSAAAVVNDSIYVIGGVKVGENIIDTVENYKEGQGWQEICTTAVGKRCFLSAVAL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0100 666 MobiDBLite consensus disorder prediction 208 229 - -
Dere11g0100 666 SUPERFAMILY Kelch motif 385 665 IPR015915 GO:0005515
Dere11g0100 666 Pfam Development and cell death domain 34 160 IPR013989 -
Dere11g0100 666 Pfam Kelch motif 563 607 IPR006652 GO:0005515
Dere11g0100 666 Pfam Kelch motif 422 466 IPR006652 GO:0005515
Dere11g0100 666 Pfam Kelch motif 475 512 IPR006652 GO:0005515
Dere11g0100 666 Pfam Kelch motif 519 560 IPR006652 GO:0005515
Dere11g0100 666 Gene3D - 373 664 IPR015915 GO:0005515
Dere11g0100 666 PANTHER - 21 664 IPR044832 GO:0034976
Dere11g0100 666 ProSiteProfiles DCD domain profile. 31 163 IPR013989 -
Dere11g0100 666 SMART kelc_smart 386 432 IPR006652 GO:0005515
Dere11g0100 666 SMART kelc_smart 574 620 IPR006652 GO:0005515
Dere11g0100 666 SMART kelc_smart 433 479 IPR006652 GO:0005515
Dere11g0100 666 SMART kelc_smart 527 573 IPR006652 GO:0005515
Dere11g0100 666 SMART kelc_smart 480 526 IPR006652 GO:0005515
Dere11g0100 666 SMART dcd 31 163 IPR013989 -
Dere11g0100 666 Coils Coil 340 360 - -
Dere11g0100 666 MobiDBLite consensus disorder prediction 215 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0100 Dere-ChrDere11 1596546 1601514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0100 518 633 EF-hand Containing Proteins AT4G39560 32.258 4.96e-08 53.1