Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0096 ATGGGAGGTTGTTGCAGTTGCGAGATTTCGTTTGGAAGCAAGGCGATTAGAGAGATAGATGATAGAGAACGTGGTCGCCGAGAGCACGATGATATTACATATGGAGATTACGGAGCTCGAATCAGGTTAAGAGGTTCCTCTAATTCTATATCAATGTACTGTCAACAAGGAAGTAAAGGGATCAACCAAGATGCGTTAACAGTTTGGGAGAACTTCACTGGAGAAAAAGGCATGGTCTTCTGTGGTGTTTTCGATGGTCATGGTCCTCTTGGCCACAAGGTTTCACATTATATACGTGACAATCTACCCTCAAAACTCTCTGCAATAATTAAAATGTCTCATCAAAAGAAGGTTGGCAAACTCTGGGACGCTTATGCTCCAAATAGAGGCAGCCCTGTTAATGCGTCTGGTCAAAATGATCAAAACATGTCCCTTGCTTCATGGGAGGGTATCGTTGTCAAATCTTTCAACGAGATGGATGAAGATGTTGCTAGAGACATCAATACTGACAGCTTTTCTAGTGGTACTACTGCTGTAACTGTAATTCGACAGGGCGACCAGCTGATAATTGGAAATTTGGGGGATTCTCGTGCAGTTCTTTGCACGAGAGGAGATAATGACCAACTTACTCCAATTCAACTCACTGTGGACTTGAAACCAGATATTCCAACTGAAGCTTTGAGAATCCAAAATTGTGAAGGCAGAATTTTTGCTGCAGTAGAAGAATCACAAGTTTACAGGGTATATATGCCTGATGAAGATTGTCCAGGACTAGCTATGTCTAGAGCCTTTGGAGATTTCTGCCTGAAAGATTATGGCCTCATCTCTGCTCCTGACGTCTTCTATAGAAAAATAACCAAGCAGGATGAATTTGTGGTTTTAGCAACTGATGGGATTTGGGATGTGTTATCAAACACTGAAGTAATAAACATAGTTGCTTCAGCACCAAGGAGAGCCAGGGCAGCAAAAATGTTAGTAAGGCATGCTGTTGCCACCTGGAGATACAAGTATCCTAATGCCAAGATTGACGATTGTGCAGTGATATGCTTGTTCCTGAATGAACAGCCTACTCTAACCAATTCTCCATCTAATAGGAGCAATATACATCAAGGGAAGTACCTTGGTCCTCTTGGCTGTAAACCCACTAGATATGAAGGCACTGAAAGTCGTTTAGATGATGGCAGGAGTTCTATAATAGAATTAGGGCAAGAATTGGATGGTCGTGGAGGGTTATCTAGAGCCAACTCTGTATCAAATTCAAAATATCCACAACTCTCTAGGGTTGTGAGTAGAAAGCAATCTCCTCAGTATCCTGACAGGGTTGAAGTTCACTAG 1335 0.4217 MGGCCSCEISFGSKAIREIDDRERGRREHDDITYGDYGARIRLRGSSNSISMYCQQGSKGINQDALTVWENFTGEKGMVFCGVFDGHGPLGHKVSHYIRDNLPSKLSAIIKMSHQKKVGKLWDAYAPNRGSPVNASGQNDQNMSLASWEGIVVKSFNEMDEDVARDINTDSFSSGTTAVTVIRQGDQLIIGNLGDSRAVLCTRGDNDQLTPIQLTVDLKPDIPTEALRIQNCEGRIFAAVEESQVYRVYMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRKITKQDEFVVLATDGIWDVLSNTEVINIVASAPRRARAAKMLVRHAVATWRYKYPNAKIDDCAVICLFLNEQPTLTNSPSNRSNIHQGKYLGPLGCKPTRYEGTESRLDDGRSSIIELGQELDGRGGLSRANSVSNSKYPQLSRVVSRKQSPQYPDRVEVH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0096 444 Gene3D - 42 355 IPR036457 -
Dere11g0096 444 SUPERFAMILY PP2C-like 46 354 IPR036457 -
Dere11g0096 444 MobiDBLite consensus disorder prediction 407 444 - -
Dere11g0096 444 ProSiteProfiles PPM-type phosphatase domain profile. 49 352 IPR001932 -
Dere11g0096 444 Pfam Protein phosphatase 2C 74 331 IPR001932 -
Dere11g0096 444 PANTHER PROTEIN PHOSPHATASE 47 350 IPR015655 GO:0004722|GO:0006470
Dere11g0096 444 CDD PP2Cc 48 352 IPR001932 -
Dere11g0096 444 SMART PP2C_4 40 350 IPR001932 -
Dere11g0096 444 MobiDBLite consensus disorder prediction 412 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0096 Dere-ChrDere11 1557580 1560746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0096 1 378 PP2C-type Phosphatase Gene Family AT5G01700 50.380 6.96e-124 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0108 12 1388087 1390441 Dere11g0096 11 1557580 1560746 CCT