Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0093 ATGGACAATATAAACTGGGGAATTTCTCAACTCAAAAGTTTTGATCAAGTTGGACTTGAAGATGATGATGCTACGTTCAACTCAAACATGCCTCCCATAAGTTCATTATTCCTCTCTTCTCCGTCACCAATTTCTCCTTCTTCAGAGTTCTTCAACTCTTCTAATATTCTTTCATCTCCCACTACTACTGATCAGGATTACAGGTGGAGAAGCACTTCAAGCGAGGATCAACAACGTAACAAGAAGGAAACCAATTACTCTGACTACTTTTCATTTCAATCTTCTTCATCCAAGGAACCACTGAAGAAATATGAAACATGGATATTCAATGAAGCCACAAAAAACCAAACCAATCTGTCATCAGTTCAGAAATTTTCCTCACCAGAAATGGAAGCATCAAAACAAAAAATAGAGGGCAATCTTCCTTCTGGGTCTGCAGTACAGAAAAGATCAGATTCAGAAGATGGGTATAACTGGAGAAAATATGGTGAAAACCAAGTGAAAGGAAGTGAGAATATTCGAAGTTATTACAAGTGCACGAATCCAAGTTGCTCTGTGAAGAAGAAGGTAGAGAGGAATCTGGAAGGTCAAATCACTGAAATAGTACATAAAGGAAGCCATAACCATCCAAAGCCTCCGGCTTCTAAGAGAGCAAGTCTTCATTCAATATCATCATCACAGCATTCTTGGACCTGTATTAACTCTGGGGTTTCTGATCAATCTGTTGTCACCTTAGGGACTCCAAAAATGGAGATTGTCTCCATGCAAGAAGTCTCTGTTGGAGAAGAAGACTTTGAGCAAACATCACAGACTAGTTATTGTGGAGGAGACGAGGATGATTTTGGACCTGAGGGCAAAAGAAGGAAGGGAGAGAGTTATGAGATGGATGAGAGCAGAACTGTGAGAAAGCCAATAGTTGTAGTTCAAACAACAAGTGAGATTGATATACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTTGTTAAAGGAAATCCAAACCCAAGGAGCTACTACAAGTGCACAACACAAGGTTGTGTGGTGAGAAAACATGTGGAGCGAGCCGCACATGATGCCAAAGCTGTGATCACAACTTATGAAGGGAAGCACAACCATGGTGTTCCTGAATCAAAAAGAAGTTCACTGAATAGTACCAACACTGGCAATAATATAGGTGTGCCTATGAGGCCCTCTGTTGTCACCGACTATTCTAGCTTTCCAAACTCTCTTTATAATGCAAGGCCACTGCCAACATATGAGAGTCCTTATGAACCATTTCCCTTAGAAATGTTTCAGAGTCCCAATGCAAGTCATGCACAACATGGCTCAGATGTTAAGAAGTATGAACACTAA 1359 0.4032 MDNINWGISQLKSFDQVGLEDDDATFNSNMPPISSLFLSSPSPISPSSEFFNSSNILSSPTTTDQDYRWRSTSSEDQQRNKKETNYSDYFSFQSSSSKEPLKKYETWIFNEATKNQTNLSSVQKFSSPEMEASKQKIEGNLPSGSAVQKRSDSEDGYNWRKYGENQVKGSENIRSYYKCTNPSCSVKKKVERNLEGQITEIVHKGSHNHPKPPASKRASLHSISSSQHSWTCINSGVSDQSVVTLGTPKMEIVSMQEVSVGEEDFEQTSQTSYCGGDEDDFGPEGKRRKGESYEMDESRTVRKPIVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTQGCVVRKHVERAAHDAKAVITTYEGKHNHGVPESKRSSLNSTNTGNNIGVPMRPSVVTDYSSFPNSLYNARPLPTYESPYEPFPLEMFQSPNASHAQHGSDVKKYEH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0093 452 MobiDBLite consensus disorder prediction 138 152 - -
Dere11g0093 452 FunFam WRKY transcription factor 143 213 - -
Dere11g0093 452 ProSiteProfiles WRKY domain profile. 154 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 FunFam WRKY transcription factor 33 304 370 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 279 296 - -
Dere11g0093 452 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 Pfam WRKY DNA -binding domain 318 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 Gene3D WRKY domain 142 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 Gene3D WRKY domain 302 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 MobiDBLite consensus disorder prediction 69 83 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 259 296 - -
Dere11g0093 452 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 83 392 IPR044810 GO:0003700
Dere11g0093 452 SUPERFAMILY WRKY DNA-binding domain 309 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 ProSiteProfiles WRKY domain profile. 312 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 MobiDBLite consensus disorder prediction 261 275 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 134 158 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 202 222 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 44 68 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 44 98 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 370 399 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 379 396 - -
Dere11g0093 452 MobiDBLite consensus disorder prediction 432 452 - -
Dere11g0093 452 SMART WRKY_cls 153 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 SMART WRKY_cls 317 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere11g0093 452 MobiDBLite consensus disorder prediction 84 98 - -
Dere11g0093 452 SUPERFAMILY WRKY DNA-binding domain 151 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0093 Dere-ChrDere11 1507904 1511862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0093 35 411 WRKY Transcription Factor Family AT2G38470 45.301 3.13e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere11g0093 WRKY 2.5e-24 CL0274