Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0091 ATGAAGAAGCAGAAATCCACGGAAGCGAAGAACCCCTTTGATTTTCTGTCGGAGGAGCTTGTCTTCACCATCCTCGACCACCTTGCTCCGAACCCACTTGACAAAAAGTCGTTTTCCTTAGTCTGCAAATCTTTCCACGCAATCGAAGCCAAACATCGCCGAACCATTACGCCTCTTCGCTCCGAACTCCTTCCTTCGATCTTGAATCGATACCCATTGGTTACCCATGTCGATCTCTCTCTGTGCCCCAGGGTGTCTGATAAATCCCTCAACTTTATAGCGAACGCTTGCAGTACCACGCTCCGACGGATCGATCTCTCGCGGTCCAAGTTCTTCTCTGCTAACGGGTTGTTGAGTTTGGCTCTTAACTGCAAGAACTTGGTAGAGCTAGACTTGTCCAATGCGACGGAGCTGAAAGACGCGGCGGCTTCTGTGGTGGCTCAGGCAATGAATTTGGAGAAGCTGTGGTTGGCGAGGTGTAAGCTAATAACGGACATAGGAGTTGGGTGTATAGCAGTTGGGTGTAGGAAGTTGAAATTGATTTGCTTGAAGTGGTGTTTGGGTGTGGGTGATTTAGGGGTGGACTTGATCGCTGTCAAGTGCAAGGAACTCCGTAGTTTGGATCTCTCTTATCTGCCTATCACAGACAAATGTCTTTCTTCAATTGTTAAATTGCAATACCTTGAAGATTTAGTTCTCGAAGGATGCTTTGGCATCGATGATGAAAGCCTTGATGTCTTCAAACAAGCTTGCACGACATTAAAGAAACTTGATATCTCAGGATGTCAAAACATAAGCCACGTAGGTCTGTCTGCCCTAACAAGCCCTTCTGGATGTCTAGAGCAACTTACTTTATCAGATGGTTCTCCTGTGACACTTGCCCTTGCTGATGCTTTGAATAAACTTCCCATGCTGCAATCAATCATTTTAGATGGCTGCCTGGTTACTTCTGCTGGATTAAGGGCCATTGGAAGTTCATGCAAGTCATTAAAAGAGCTGAGTTTAAGAAAATGTTTGGAAGTGACAGATGAAGCTCTCTCATTTCTTGTGTCGAAACACAAGGATTTGAGGAAGCTTGACATCACATGCTGCCGTGAGATAACTCATCTTTCAATTGCCAGCATTGTGAATTCATGCATAAGTCTCACTTCCCTCAGGATGGAGTCATGTATCCTTGTTCCAAGAGAATCATTTGTGTTGCTTGGACAGCGATGCAATTCGCTTGAGGAACTTGACCTAACAGATAATGAAATTGATGACGAAGGTCTTAAGTCCATTTCTCGCTGTTCCAGACTCTCCTGTCTAAAACTAGGAATCTGCCTGAACATAACTGACAAGGGACTTACCTATGTTGGCATGTCCTGCTCAAAGTTGAGGGAGCTAGATCTCTACAGGTCTACAGGAATAACGGATTTGGGCATTTCAGCAATTGCATGTGGTTGCCCCAGGCTTGAGATGATTAATGTTGCTTATTGTACTGACATCACCGATGGTTCCTTATTCTCCTTGTCAAAATGCTCAGAGTTGAAAACACTGGAAATCCGTGGATGTCTTCATGTCACCTCTAAGGGTCTAACAGCTATTGCAATGAATTGTAAGCAACTAACTCGTCTAGACATAAAGAAGTGTTATAACATTGATGATAGCGGGATGATTCCACTTGCACGTTGGTCCCAAAATCTAAGACAGATAAATTTGTCATACAGTACAGTCACAGATGTGGGGCTATTGTCACTTGCTAGCATCAGTTGCCTACACACCTTTACTGTTCTGCACTCACAGGGTGTGACCCCAAGAGGACTCGCTGCTGCACTATTGGCATTTGGGGGGCTAAGAAAAGTAAAGCTCCACCTTTCCTTGAGATCAATGTTACCTGAAATTCTCATCAAACACTTAGAAGCACGTGGCTGCATGTTTGAATGGAGGAATAAAGTGTTTCAGGCTGAATTGGATCCCAAGTGTTGGAAGCTACAGTTGGAAGATCTAATGCAAGTTGTTTAA 2001 0.4433 MKKQKSTEAKNPFDFLSEELVFTILDHLAPNPLDKKSFSLVCKSFHAIEAKHRRTITPLRSELLPSILNRYPLVTHVDLSLCPRVSDKSLNFIANACSTTLRRIDLSRSKFFSANGLLSLALNCKNLVELDLSNATELKDAAASVVAQAMNLEKLWLARCKLITDIGVGCIAVGCRKLKLICLKWCLGVGDLGVDLIAVKCKELRSLDLSYLPITDKCLSSIVKLQYLEDLVLEGCFGIDDESLDVFKQACTTLKKLDISGCQNISHVGLSALTSPSGCLEQLTLSDGSPVTLALADALNKLPMLQSIILDGCLVTSAGLRAIGSSCKSLKELSLRKCLEVTDEALSFLVSKHKDLRKLDITCCREITHLSIASIVNSCISLTSLRMESCILVPRESFVLLGQRCNSLEELDLTDNEIDDEGLKSISRCSRLSCLKLGICLNITDKGLTYVGMSCSKLRELDLYRSTGITDLGISAIACGCPRLEMINVAYCTDITDGSLFSLSKCSELKTLEIRGCLHVTSKGLTAIAMNCKQLTRLDIKKCYNIDDSGMIPLARWSQNLRQINLSYSTVTDVGLLSLASISCLHTFTVLHSQGVTPRGLAAALLAFGGLRKVKLHLSLRSMLPEILIKHLEARGCMFEWRNKVFQAELDPKCWKLQLEDLMQVV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0091 666 Pfam Leucine Rich repeat 506 529 IPR001611 GO:0005515
Dere11g0091 666 Pfam Leucine Rich repeat 251 273 IPR001611 GO:0005515
Dere11g0091 666 Pfam Leucine Rich repeat 558 580 IPR001611 GO:0005515
Dere11g0091 666 Pfam Leucine Rich repeat 533 555 IPR001611 GO:0005515
Dere11g0091 666 Pfam Leucine Rich repeat 405 427 IPR001611 GO:0005515
Dere11g0091 666 Pfam Leucine Rich repeat 454 478 IPR001611 GO:0005515
Dere11g0091 666 SUPERFAMILY RNI-like 54 390 - -
Dere11g0091 666 SUPERFAMILY RNI-like 294 594 - -
Dere11g0091 666 Gene3D Ribonuclease Inhibitor 397 649 IPR032675 -
Dere11g0091 666 PANTHER UNCHARACTERIZED 531 616 - -
Dere11g0091 666 SUPERFAMILY F-box domain 5 48 IPR036047 GO:0005515
Dere11g0091 666 SMART LRR_CC_2 405 429 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 455 480 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 71 96 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 149 174 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 175 200 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 201 225 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 532 557 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 353 378 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 98 123 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 327 352 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 481 506 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 558 582 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 302 326 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 507 531 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 379 404 IPR006553 -
Dere11g0091 666 SMART LRR_CC_2 251 276 IPR006553 -
Dere11g0091 666 Gene3D Ribonuclease Inhibitor 293 396 IPR032675 -
Dere11g0091 666 FunFam F-box/LRR-repeat protein 3 401 640 - -
Dere11g0091 666 Gene3D Ribonuclease Inhibitor 6 196 IPR032675 -
Dere11g0091 666 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0091 Dere-ChrDere11 1499250 1503436 Dispersed/Wgd