Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0076 ATGAACTTTTCAAAGTTCAAATTTAGCTTTTGTTTGTTGCTATTATGTGTGAGTGGGATAGTTTCAGCTTATGATCAACTATCCTCTGATTATTATGCATTGTCGTGTCCTGTTGCTCTTACTACCATTAAGGCAGTGGTTGTGGCCGCCATATTAAAAGAGCGTCGCATGGGAGCATCCTTGCTTCGTCTTCATTTCCATGACTGCTTTGTCCAAGGTTGCGATGCATCAATATTGTTAGACGACACACCAAATTTTACAGGTGAAAAGACTGCTTTTCCAAACGTTAATTCTGTGAGGGGATTTGAGGTTATAGACAGGATCAAATCTACACTGGAGTTGTTGTGTCCTGGTGTTGTCTCTTGTGCTGACATTGTTGCTGTTGCTGCCAGAGAATCTGTCTTAATGCTGGGAGGACCATACTGGCCAGTGAAATTGGGAAGAAGAGACTCAACCACAGCAAGTCTGAAGGATGCAAATACAGATTTGCCCTCACCCCTTTTGGATCTTAGTGGCCTCATCTCCGCTTTCTCCAACAAAGGCTTTACACCCCAAGAGATGGTTGCTTTGTCAGTTATCAGTGTTTTGAAGTTGGAACCGAATATTGAGTTGGAGAAATTATTGGATTATGAGCCATTAAATTTAATTGCTTATGAATAA 660 0.4121 MNFSKFKFSFCLLLLCVSGIVSAYDQLSSDYYALSCPVALTTIKAVVVAAILKERRMGASLLRLHFHDCFVQGCDASILLDDTPNFTGEKTAFPNVNSVRGFEVIDRIKSTLELLCPGVVSCADIVAVAARESVLMLGGPYWPVKLGRRDSTTASLKDANTDLPSPLLDLSGLISAFSNKGFTPQEMVALSVISVLKLEPNIELEKLLDYEPLNLIAYE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0076 219 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 SUPERFAMILY Heme-dependent peroxidases 26 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 Pfam Peroxidase 44 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 Gene3D - 30 163 - -
Dere11g0076 219 ProSiteProfiles Plant heme peroxidase family profile. 26 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 PANTHER PEROXIDASE 72-RELATED 24 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0076 219 FunFam Peroxidase 30 171 - -
Dere11g0076 219 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Dere11g0076 219 Gene3D Peroxidase, domain 2 164 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0076 Dere-ChrDere11 1242054 1245075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0076 26 191 Peroxidase AT5G05340 60.843 3.57e-71 218