Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0074 ATGTATTTTCTGCTAGTGCACGAACTAACTCTCAAAACCACAATGAACTTTTCCCAGTTCAAATTTGGCTTCTGTTTGTTGCTATTATGTGTGAGTGGGATAGTTTCAGCTTATGATCAATTATCCTCTGATTATTATGCATTGTCGTGTCCTGTTGCTCTTACTACCATTAAGGCAGCGGTTGAGGCCGCCATATTAAAAGAGCCTCACATGGGAGCATCCTTGCTTCGTCTTCATTTCCATGACTGCTTTGTCCAACTGGGAGGACCATACTGGCCAGTGAAATTGGGAAGAAGAGACTCAACCACAGCAAGTCTGAAGGATGCAAATACAGATTTGCCCTCACCCCTTTTGGATCTTAGTGGCCTCATCTCTGCTTTCTCCAACAAAGGCTTTACACCCCAAGAGATGGTTGCTTTGTCAGGATCTCACACAATAGGGCAAGCGAGGTGCACAACTTTCAGGACAAGGATTTACAACGACACTAACATAGATAAGTCGTTTGCAAAATCACTACAAGCGACATGTCCAAGCACAGGTGGTGACAGCAATTTATCACCTTTAGATGTCACAAGCCCTAACTTCTTTGACAACTCTTACTTCAAGAATCTGGTGAACAAAAAGGGTCTCTTGCACTCAGACCAAGCACTCTTCAATGGGGGTTCCACAGATTCCTTAGTTTACACTTACGTCAACAATCCTTCGCGTTTCAGAACAGATTTTGCTAACGCCATGATCAAGATGGGTGATCTCAGCCCTCTCACTGGTTCCAATGGAGAGATCAGGAAAAATTGCAGGAAGGTCAACTAA 810 0.437 MYFLLVHELTLKTTMNFSQFKFGFCLLLLCVSGIVSAYDQLSSDYYALSCPVALTTIKAAVEAAILKEPHMGASLLRLHFHDCFVQLGGPYWPVKLGRRDSTTASLKDANTDLPSPLLDLSGLISAFSNKGFTPQEMVALSGSHTIGQARCTTFRTRIYNDTNIDKSFAKSLQATCPSTGGDSNLSPLDVTSPNFFDNSYFKNLVNKKGLLHSDQALFNGGSTDSLVYTYVNNPSRFRTDFANAMIKMGDLSPLTGSNGEIRKNCRKVN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0074 269 ProSiteProfiles Plant heme peroxidase family profile. 22 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 Gene3D - 87 269 - -
Dere11g0074 269 PRINTS Plant ascorbate peroxidase signature 130 151 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 PRINTS Plant ascorbate peroxidase signature 88 100 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 FunFam Peroxidase 114 248 - -
Dere11g0074 269 SUPERFAMILY Heme-dependent peroxidases 40 269 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Dere11g0074 269 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 CDD secretory_peroxidase 40 268 IPR033905 GO:0004601|GO:0042744
Dere11g0074 269 ProSitePatterns Peroxidases proximal heme-ligand signature. 136 146 IPR019793 -
Dere11g0074 269 Gene3D - 40 86 - -
Dere11g0074 269 PANTHER PEROXIDASE 72-RELATED 38 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere11g0074 269 Gene3D Peroxidase, domain 2 114 248 - -
Dere11g0074 269 Pfam Peroxidase 87 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0074 Dere-ChrDere11 1015081 1060705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0074 40 85 Peroxidase AT5G05340 54.348 9.61e-12 62.4