Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0069 ATGGAAGCGGAACCGGTCCAAAACATGGGTCTAGAAGAACCGGGTTCCGGGATAAAGGATCAGAATTCGAGAGTGGAGATTGATATCTCGGCTCCGTTTGAATCCGTGAAGGAGGCTGTGACCCGATTCGGGGGTCTCGGGTTCTGGAGGCCCACCCATAATATTCTTCCGGGTCTTGATCAGCAGGAAGACACACATGAGCATGACACTAGAAAAGTAGAGGAGGAGGCAACAGTATTGGAGAAAGAACTGATTTTGAAAGAAAGGGAAACTTTAGATGTTTTGAAAGACCTGGAAAGTACAAAAAAGCTTATTGAAGATTTGAAGTTGAAGCTACAAGAGGAAGACTATGAAGCCAATTTGAAGAGCAACGAAGAAGATAAGGAGAACCAAGTGAATCAATTACACATTCTTCAGAATTCAAAGCAAGGTTTTAGCCCTTGCCCTTCATCTAAACCAGGTCTGATATTGATGGAGTTGAAGCAGGCCAAATTGAACTTAACCAGAACCACAAATGATCTAGCTAATGTACGAGCTTCTGTTGTAATGCTTAGCAAGAAGCTAGAGAAGGAAAGAGTCTCACTCGGGAAAACTCGCGAGAGGTTGACACAAAATTCTTCAAAATTATCTTCTCTTGAGGAAGAGCTGAACCAGACAAGACTGAGACTTCAAGTGGCAAAAGATGATCCTTCAGATATCACAAAGGAGCTTCTGAGGTTGAGTTCTGAGGCAGAACATTTCAAAAAAATAGGAGAAGCTGCAAAAACAGAAGTCTTGAGGACTTTGTCCGAGATTGAACAGACAAAATCTATGATAAAAACAGCTGAATTAAGGTTGATTGCTGCTAGAAAGATGAAGGAAGCTGCTAGTGCTGCAGAATCAGCTTCCTTAGCAGAAATCAATGTTTTATCCAATAATTTCAAGAGTTCATCTGAAGTAGTGACTCTTTCATTTGAAGAATATAATGCTCTAACATCTAAAGCCCTAGACGCAGATGAAAACTCAAAAGGAAGAGTTACAGATGCCATGCTTCAACTTGATGAAGCAAATTTATCGAAAATAGAGATCCTGGAAAGGGTAGAGGAAGCTACAAAAGAAGTGAAGACCTGCAAGAAAGCTTTCAAAGAAGCTATGGAAAGAGTAGAAGCTGCAAATAGAGGGAAGATAGCAATTGAAGAAGCTTTGAGGAAGGGTCCTGAAAGGTCTTCTTCTGTATACAACTCGACCAAGTTCAAAAATTCTCACCATCGAAGAGATCCTCAGTTAGTTGATGGAAATGCATTGAATGTAGAAGATGTTGAAGCCAAACCAGATGATTCAAAGCCAGTTCTATCAATTGGACAAATACTGAGAAGGAAGCTGCTTCTTTCACAGGAGTTTGAAGAAGGATCACTAGGTCACATGCTTGGAAAACAAAAGGAGGGTTCATACTTCGGCAAGCAGTTTTGTGCAAAGAGAAAGAAATTTGGGTTTACTAGATTGTCACATCTTTTTCCAAAGCAACAGAAGAAAAAGAAGCCAACTTTGAATTTGAGCACATCCTCACCGATAACCCAAACAAGCAAGGCGGCTACCAATTTGACGACAAAGTTCTCAACTTCAATCCGAGCGAAGGCTTCCTCATCTGTGTCTCCCATACCCTTCCTCTCCTTCCAGAACCTGAAACCCAAAGTCGTGATTGCTTTGCTCTTCCACAGTGCCTTGCACAAAGCATTGTATGCACCAACATGA 1731 0.4136 MEAEPVQNMGLEEPGSGIKDQNSRVEIDISAPFESVKEAVTRFGGLGFWRPTHNILPGLDQQEDTHEHDTRKVEEEATVLEKELILKERETLDVLKDLESTKKLIEDLKLKLQEEDYEANLKSNEEDKENQVNQLHILQNSKQGFSPCPSSKPGLILMELKQAKLNLTRTTNDLANVRASVVMLSKKLEKERVSLGKTRERLTQNSSKLSSLEEELNQTRLRLQVAKDDPSDITKELLRLSSEAEHFKKIGEAAKTEVLRTLSEIEQTKSMIKTAELRLIAARKMKEAASAAESASLAEINVLSNNFKSSSEVVTLSFEEYNALTSKALDADENSKGRVTDAMLQLDEANLSKIEILERVEEATKEVKTCKKAFKEAMERVEAANRGKIAIEEALRKGPERSSSVYNSTKFKNSHHRRDPQLVDGNALNVEDVEAKPDDSKPVLSIGQILRRKLLLSQEFEEGSLGHMLGKQKEGSYFGKQFCAKRKKFGFTRLSHLFPKQQKKKKPTLNLSTSSPITQTSKAATNLTTKFSTSIRAKASSSVSPIPFLSFQNLKPKVVIALLFHSALHKALYAPT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0069 576 Coils Coil 160 180 - -
Dere11g0069 576 Coils Coil 185 229 - -
Dere11g0069 576 MobiDBLite consensus disorder prediction 1 22 - -
Dere11g0069 576 Coils Coil 346 380 - -
Dere11g0069 576 Coils Coil 95 134 - -
Dere11g0069 576 Coils Coil 70 90 - -
Dere11g0069 576 MobiDBLite consensus disorder prediction 402 421 - -
Dere11g0069 576 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 25 118 - -
Dere11g0069 576 Pfam Weak chloroplast movement under blue light 158 397 IPR008545 -
Dere11g0069 576 Pfam Weak chloroplast movement under blue light 25 120 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0069 Dere-ChrDere11 924392 929262 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0069 11 924392 929262 Dere12g0720 12 13322507 13324609 CCT
Dere11g0069 11 924392 929262 Dere11g0069 11 924392 929262 ECH